(44 nodes) Transport of Mature mRNA Derived from an Intronless Transcript network (Daphnia magna)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	APZ42_010899	Nucleoporin 98-96kD-like protein. (1655 aa)
	APZ42_016953	Putative Nucleoporin NDC1. (311 aa)
	APZ42_017958	Nucleoprotein TPR. (2316 aa)
	APZ42_018881	Symplekin. (1109 aa)
	APZ42_019609	Nuclear pore complex protein Nup88. (735 aa)
	APZ42_020217	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (151 aa)
	APZ42_026286	Fizzy-related protein. (1396 aa)
	APZ42_026406	Nucleoporin 154kD, isoform A. (338 aa)
	APZ42_026545	Nuclear pore complex protein Nup155. (588 aa)
	APZ42_026668	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (915 aa)
	APZ42_027333	Nuclear pore complex protein Nup205. (1838 aa)
	APZ42_029205	Nucleoporin p58/p45. (480 aa)
	APZ42_030202	Putative Nuclear pore complex protein Nup98-Nup96. (155 aa)
	APZ42_030621	Nuclear pore complex protein Nup160. (1379 aa)
	APZ42_031077	Nuclear pore complex Nup153-like protein. (1496 aa)
	APZ42_031762	E3 SUMO-protein ligase RanBP2. (2719 aa)
	APZ42_000930	Nuclear pore complex protein Nup155. (248 aa)
	APZ42_007055	Nuclear pore complex protein Nup155. (121 aa)
	APZ42_013510	Nuclear pore complex protein Nup155. (224 aa)
	APZ42_013766	Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
	APZ42_014494	WD_REPEATS_REGION domain-containing protein. (202 aa)
	APZ42_015014	Cleavage and polyadenylation specificity factor subunit 1. (1380 aa)
	APZ42_014949	Fip1 domain-containing protein. (535 aa)
	EOG090X07N7	SEC13 protein; Belongs to the WD repeat SEC13 family. (311 aa)
	APZ42_000921	Nuclear pore complex protein Nup155. (202 aa)
	APZ42_022012	mRNA export factor. (333 aa)
	APZ42_015077	Nuclear pore protein. (825 aa)
	APZ42_011135	Aladin. (467 aa)
	APZ42_031667	Cleavage and polyadenylation specificity factor subunit 3. (689 aa)
	APZ42_022409	Nuclear pore complex protein Nup133. (1116 aa)
	APZ42_023529	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
	APZ42_015305	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family. (363 aa)
	APZ42_023435	Nuclear pore membrane glycoprotein 210. (1876 aa)
	APZ42_028690	THO complex subunit 4-A. (246 aa)
	APZ42_011579	Nuclear cap-binding protein subunit 1. (809 aa)
	APZ42_016152	Cleavage and polyadenylation specificity factor subunit 4. (277 aa)
	APZ42_022227	Nuclear pore complex protein Nup98-Nup96. (1843 aa)
	APZ42_018104	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
	APZ42_034337	Putative Nuclear pore glycoprotein p62. (787 aa)
	APZ42_021847	Nuclear pore complex protein Nup54. (580 aa)
	APZ42_023172	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (642 aa)
	APZ42_026180	Nucleoporin Nup37. (320 aa)
	APZ42_012657	Cleavage and polyadenylation specificity factor subunit 2. (734 aa)
	APZ42_023834	Nuclear pore complex protein Nup50. (443 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000921	APZ42_000930	A0A162C8L9	A0A164JAB6	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.578
APZ42_000921	APZ42_007055	A0A162C8L9	A0A164FJF0	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.467
APZ42_000921	APZ42_010899	A0A162C8L9	A0A162T9B4	Nuclear pore complex protein Nup155.	Nucleoporin 98-96kD-like protein.	0.900
APZ42_000921	APZ42_011135	A0A162C8L9	A0A0P5ZEL6	Nuclear pore complex protein Nup155.	Aladin.	0.874
APZ42_000921	APZ42_011579	A0A162C8L9	A0A0P5IV70	Nuclear pore complex protein Nup155.	Nuclear cap-binding protein subunit 1.	0.638
APZ42_000921	APZ42_012657	A0A162C8L9	A0A0N8AQ29	Nuclear pore complex protein Nup155.	Cleavage and polyadenylation specificity factor subunit 2.	0.577
APZ42_000921	APZ42_013766	A0A162C8L9	A0A162QIP0	Nuclear pore complex protein Nup155.	Putative Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_014494	A0A162C8L9	A0A162PTB8	Nuclear pore complex protein Nup155.	WD_REPEATS_REGION domain-containing protein.	0.892
APZ42_000921	APZ42_015014	A0A162C8L9	A0A162P3Y6	Nuclear pore complex protein Nup155.	Cleavage and polyadenylation specificity factor subunit 1.	0.557
APZ42_000921	APZ42_015077	A0A162C8L9	A0A0P6GRK8	Nuclear pore complex protein Nup155.	Nuclear pore protein.	0.923
APZ42_000921	APZ42_015305	A0A162C8L9	A0A0P5X6F0	Nuclear pore complex protein Nup155.	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	0.907
APZ42_000921	APZ42_016953	A0A162C8L9	A0A165A9R2	Nuclear pore complex protein Nup155.	Putative Nucleoporin NDC1.	0.881
APZ42_000921	APZ42_017958	A0A162C8L9	A0A164ZGU0	Nuclear pore complex protein Nup155.	Nucleoprotein TPR.	0.749
APZ42_000921	APZ42_018104	A0A162C8L9	A0A0P5DW53	Nuclear pore complex protein Nup155.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.935
APZ42_000921	APZ42_018881	A0A162C8L9	A0A164YWS4	Nuclear pore complex protein Nup155.	Symplekin.	0.571
APZ42_000921	APZ42_019609	A0A162C8L9	A0A164YAI6	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup88.	0.875
APZ42_000921	APZ42_021847	A0A162C8L9	A0A0P5BVK0	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup54.	0.911
APZ42_000921	APZ42_022012	A0A162C8L9	A0A162C8J9	Nuclear pore complex protein Nup155.	mRNA export factor.	0.746
APZ42_000921	APZ42_022227	A0A162C8L9	A0A0P5EGA2	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_022409	A0A162C8L9	A0A0P5YWY4	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup133.	0.915