(22 nodes) Glutamate Neurotransmitter Release Cycle network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	APZ42_033228	Putative Homeobox protein Hox-A1. (434 aa)
	APZ42_020758	Syntaxin-1A. (305 aa)
	APZ42_019810	Peripheral-type benzodiazepine receptor-associated 1-like protein. (1631 aa)
	APZ42_030967	Ras-related protein Rab-3A. (219 aa)
	APZ42_019647	Syntaxin-1A; Belongs to the syntaxin family. (294 aa)
	APZ42_026226	PRA1 family protein. (189 aa)
	APZ42_023165	Syntaxin-binding protein; Belongs to the STXBP/unc-18/SEC1 family. (588 aa)
	APZ42_019823	Putative Peripheral-type benzodiazepine receptor-associated protein. (681 aa)
	APZ42_022192	Putative Phorbol ester/diacylglycerol-binding protein unc-13. (1074 aa)
	APZ42_022183	Protein unc-13 A. (3026 aa)
	APZ42_022340	Complexin. (86 aa)
	APZ42_023029	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (144 aa)
	APZ42_023746	Glutaminase kidney. (306 aa)
	APZ42_027855	Amino acid transporter. (527 aa)
	APZ42_028183	Regulating synaptic membrane exocytosis-like protein. (128 aa)
	APZ42_028167	Regulating synaptic membrane exocytosis 2-like protein. (1032 aa)
	EOG090X04X8	Vesicular glutamate transporter 2. (609 aa)
	APZ42_032515	Synaptotagmin 1 protein, variant 2. (445 aa)
	APZ42_012929	Vesicle-associated membrane protein 8. (122 aa)
	APZ42_013321	Putative Syntaxin; Belongs to the syntaxin family. (294 aa)
	APZ42_013305	Liprin-alpha. (1255 aa)
	APZ42_025904	Complexin. (74 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012929	APZ42_013305	A0A162RBY0	A0A162QW26	Vesicle-associated membrane protein 8.	Liprin-alpha.	0.709
APZ42_012929	APZ42_013321	A0A162RBY0	A0A162QWY5	Vesicle-associated membrane protein 8.	Putative Syntaxin; Belongs to the syntaxin family.	0.964
APZ42_012929	APZ42_019647	A0A162RBY0	A0A0P5JJE4	Vesicle-associated membrane protein 8.	Syntaxin-1A; Belongs to the syntaxin family.	0.973
APZ42_012929	APZ42_019810	A0A162RBY0	A0A162CM76	Vesicle-associated membrane protein 8.	Peripheral-type benzodiazepine receptor-associated 1-like protein.	0.622
APZ42_012929	APZ42_019823	A0A162RBY0	A0A164XQU8	Vesicle-associated membrane protein 8.	Putative Peripheral-type benzodiazepine receptor-associated protein.	0.622
APZ42_012929	APZ42_020758	A0A162RBY0	A0A0P6AU98	Vesicle-associated membrane protein 8.	Syntaxin-1A.	0.973
APZ42_012929	APZ42_022183	A0A162RBY0	A0A164W4P6	Vesicle-associated membrane protein 8.	Protein unc-13 A.	0.779
APZ42_012929	APZ42_022192	A0A162RBY0	A0A164W4T3	Vesicle-associated membrane protein 8.	Putative Phorbol ester/diacylglycerol-binding protein unc-13.	0.779
APZ42_012929	APZ42_022340	A0A162RBY0	A0A164VFE3	Vesicle-associated membrane protein 8.	Complexin.	0.663
APZ42_012929	APZ42_023029	A0A162RBY0	A0A164VA03	Vesicle-associated membrane protein 8.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.993
APZ42_012929	APZ42_023165	A0A162RBY0	A0A0P5T1D6	Vesicle-associated membrane protein 8.	Syntaxin-binding protein; Belongs to the STXBP/unc-18/SEC1 family.	0.990
APZ42_012929	APZ42_025904	A0A162RBY0	A0A162DC52	Vesicle-associated membrane protein 8.	Complexin.	0.753
APZ42_012929	APZ42_028167	A0A162RBY0	A0A164QJQ3	Vesicle-associated membrane protein 8.	Regulating synaptic membrane exocytosis 2-like protein.	0.778
APZ42_012929	APZ42_028183	A0A162RBY0	A0A164QJR6	Vesicle-associated membrane protein 8.	Regulating synaptic membrane exocytosis-like protein.	0.771
APZ42_012929	APZ42_030967	A0A162RBY0	A0A0N8C7V6	Vesicle-associated membrane protein 8.	Ras-related protein Rab-3A.	0.846
APZ42_012929	APZ42_032515	A0A162RBY0	A0A164LM42	Vesicle-associated membrane protein 8.	Synaptotagmin 1 protein, variant 2.	0.978
APZ42_012929	APZ42_033228	A0A162RBY0	A0A0P5XEQ0	Vesicle-associated membrane protein 8.	Putative Homeobox protein Hox-A1.	0.771
APZ42_012929	EOG090X04X8	A0A162RBY0	A0A164LUH1	Vesicle-associated membrane protein 8.	Vesicular glutamate transporter 2.	0.518
APZ42_013305	APZ42_012929	A0A162QW26	A0A162RBY0	Liprin-alpha.	Vesicle-associated membrane protein 8.	0.709
APZ42_013305	APZ42_013321	A0A162QW26	A0A162QWY5	Liprin-alpha.	Putative Syntaxin; Belongs to the syntaxin family.	0.654