STRINGSTRING
APZ42_016321 APZ42_016321 APZ42_016875 APZ42_016875 APZ42_016879 APZ42_016879 APZ42_021729 APZ42_021729 APZ42_023950 APZ42_023950 APZ42_031040 APZ42_031040 APZ42_015091 APZ42_015091 APZ42_005840 APZ42_005840 APZ42_005620 APZ42_005620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_016321Deltex protein. (238 aa)
APZ42_016875E3 ubiquitin-protein ligase mind-bomb. (667 aa)
APZ42_016879E3 ubiquitin-protein ligase mind-bomb. (422 aa)
APZ42_021729Polyubiquitin-B. (611 aa)
APZ42_023950E3 ubiquitin-protein ligase. (872 aa)
APZ42_031040Ubiquitin-60S ribosomal protein L40. (128 aa)
APZ42_015091E3 ubiquitin-protein ligase NEURL1B. (628 aa)
APZ42_005840Polyubiquitin-B. (124 aa)
APZ42_005620Ubiquitin-40S ribosomal protein S27a. (122 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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