(37 nodes) Semaphorin interactions network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_024973	Cyclin dependent kinase 5 activator-like protein. (366 aa)
	APZ42_023394	Plexin-A4. (462 aa)
	APZ42_024497	Amidohydro-rel domain-containing protein. (468 aa)
	APZ42_024857	Receptor protein-tyrosine kinase. (1535 aa)
	APZ42_025916	Talin-1. (203 aa)
	APZ42_026245	Urb2 domain-containing protein. (1079 aa)
	APZ42_027139	Putative Rho guanine nucleotide exchange factor. (808 aa)
	APZ42_027135	Protein vav-like protein. (1151 aa)
	APZ42_031771	Semaphorin-2A; Belongs to the semaphorin family. (711 aa)
	APZ42_017732	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily. (298 aa)
	APZ42_028237	FERM, RhoGEF and pleckstrin domain-containing protein 1. (1606 aa)
	APZ42_028403	Plexin-A4. (1539 aa)
	APZ42_029450	Cofilin/actin-depolymerizing factor; Belongs to the actin-binding proteins ADF family. (274 aa)
	APZ42_031064	LIM domain kinase 1. (76 aa)
	APZ42_000871	Rho-associated protein kinase 2. (107 aa)
	APZ42_002599	Plexin-A4. (425 aa)
	APZ42_004669	Ras GTP-binding protein Rho1. (41 aa)
	APZ42_011805	Uncharacterized protein. (1040 aa)
	APZ42_011576	Talin-2. (2425 aa)
	APZ42_011191	Putative Tyrosine-protein kinase Fps85D. (917 aa)
	APZ42_015601	Plexin-A4. (271 aa)
	APZ42_018064	Cofilin/actin-depolymerizing factor; Belongs to the actin-binding proteins ADF family. (172 aa)
	APZ42_031668	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (459 aa)
	APZ42_030676	Semaphorin-1A; Belongs to the semaphorin family. (577 aa)
	APZ42_022688	Semaphorin-1A; Belongs to the semaphorin family. (841 aa)
	APZ42_033818	Dihydropyrimidinase-related protein 5. (611 aa)
	APZ42_026721	Tribolium castaneum heat shock protein. (298 aa)
	APZ42_020211	Heat shock protein HSP 90-alpha. (719 aa)
	APZ42_012615	Rho-related GTP-binding protein RhoF. (223 aa)
	APZ42_003002	Talin-1. (181 aa)
	APZ42_016307	Non-specific serine/threonine protein kinase. (547 aa)
	APZ42_011802	Non-specific serine/threonine protein kinase. (595 aa)
	APZ42_018883	Semaphorin-5c. (1047 aa)
	APZ42_019728	Rho-associated protein kinase 2. (1082 aa)
	APZ42_020849	Plexin-A4. (140 aa)
	APZ42_020835	Plexin-A4. (1213 aa)
	APZ42_020952	LIM domain kinase 1. (718 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000871	APZ42_002599	A0A164JBM9	A0A164I614	Rho-associated protein kinase 2.	Plexin-A4.	0.491
APZ42_000871	APZ42_004669	A0A164JBM9	A0A164GWT3	Rho-associated protein kinase 2.	Ras GTP-binding protein Rho1.	0.868
APZ42_000871	APZ42_011802	A0A164JBM9	A0A0P6EQN6	Rho-associated protein kinase 2.	Non-specific serine/threonine protein kinase.	0.482
APZ42_000871	APZ42_012615	A0A164JBM9	A0A0P5KP21	Rho-associated protein kinase 2.	Rho-related GTP-binding protein RhoF.	0.868
APZ42_000871	APZ42_015601	A0A164JBM9	A0A162NU14	Rho-associated protein kinase 2.	Plexin-A4.	0.491
APZ42_000871	APZ42_016307	A0A164JBM9	A0A0P6HYT2	Rho-associated protein kinase 2.	Non-specific serine/threonine protein kinase.	0.482
APZ42_000871	APZ42_017732	A0A164JBM9	A0A0P5J3W9	Rho-associated protein kinase 2.	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.	0.506
APZ42_000871	APZ42_018064	A0A164JBM9	A0A162CIH3	Rho-associated protein kinase 2.	Cofilin/actin-depolymerizing factor; Belongs to the actin-binding proteins ADF family.	0.525
APZ42_000871	APZ42_018883	A0A164JBM9	A0A164YWB2	Rho-associated protein kinase 2.	Semaphorin-5c.	0.413
APZ42_000871	APZ42_020211	A0A164JBM9	A0A0P5YMF1	Rho-associated protein kinase 2.	Heat shock protein HSP 90-alpha.	0.416
APZ42_000871	APZ42_020835	A0A164JBM9	A0A164XFJ3	Rho-associated protein kinase 2.	Plexin-A4.	0.491
APZ42_000871	APZ42_020849	A0A164JBM9	A0A164XFN6	Rho-associated protein kinase 2.	Plexin-A4.	0.491
APZ42_000871	APZ42_020952	A0A164JBM9	A0A164X4H5	Rho-associated protein kinase 2.	LIM domain kinase 1.	0.678
APZ42_000871	APZ42_022688	A0A164JBM9	A0A164VQY2	Rho-associated protein kinase 2.	Semaphorin-1A; Belongs to the semaphorin family.	0.413
APZ42_000871	APZ42_023394	A0A164JBM9	A0A164UZN1	Rho-associated protein kinase 2.	Plexin-A4.	0.491
APZ42_000871	APZ42_024497	A0A164JBM9	A0A164TY02	Rho-associated protein kinase 2.	Amidohydro-rel domain-containing protein.	0.466
APZ42_000871	APZ42_024857	A0A164JBM9	A0A164TND3	Rho-associated protein kinase 2.	Receptor protein-tyrosine kinase.	0.652
APZ42_000871	APZ42_026245	A0A164JBM9	A0A164SAX2	Rho-associated protein kinase 2.	Urb2 domain-containing protein.	0.487
APZ42_000871	APZ42_026721	A0A164JBM9	A0A0P5YUW5	Rho-associated protein kinase 2.	Tribolium castaneum heat shock protein.	0.416
APZ42_000871	APZ42_027135	A0A164JBM9	A0A164RB99	Rho-associated protein kinase 2.	Protein vav-like protein.	0.580