STRINGSTRING
APZ42_021729 APZ42_021729 APZ42_018910 APZ42_018910 APZ42_017625 APZ42_017625 EOG090X0BB3 EOG090X0BB3 APZ42_030931 APZ42_030931 APZ42_005840 APZ42_005840 APZ42_005620 APZ42_005620 APZ42_033479 APZ42_033479 APZ42_033028 APZ42_033028 APZ42_031040 APZ42_031040 EOG090X01A3 EOG090X01A3 APZ42_030693 APZ42_030693 APZ42_017079 APZ42_017079 APZ42_017604 APZ42_017604 APZ42_030558 APZ42_030558 APZ42_023975 APZ42_023975
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_021729Polyubiquitin-B. (611 aa)
APZ42_018910Voltage-dependent anion-selective channel. (281 aa)
APZ42_017625ZZ-type domain-containing protein. (250 aa)
EOG090X0BB3Autophagy protein 5; Involved in autophagic vesicle formation. (271 aa)
APZ42_030931Microtubule-associated proteins 1A/1B light chain 3A. (123 aa)
APZ42_005840Polyubiquitin-B. (124 aa)
APZ42_005620Ubiquitin-40S ribosomal protein S27a. (122 aa)
APZ42_033479Mitochondrial import receptor subunit TOM22. (178 aa)
APZ42_033028mTERF domain-containing protein. (360 aa)
APZ42_031040Ubiquitin-60S ribosomal protein L40. (128 aa)
EOG090X01A3Transmembrane GTPase Marf; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (760 aa)
APZ42_030693Autophagy protein 5; Involved in autophagic vesicle formation. (71 aa)
APZ42_017079Mitochondrial import receptor subunit TOM40B. (306 aa)
APZ42_017604Sequestosome-1. (574 aa)
APZ42_030558Mitochondrial import receptor subunit TOM7. (55 aa)
APZ42_023975E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (409 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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