STRINGSTRING
APZ42_030620 APZ42_030620 APZ42_019262 APZ42_019262 APZ42_022872 APZ42_022872 APZ42_011418 APZ42_011418 APZ42_012437 APZ42_012437 APZ42_032613 APZ42_032613 APZ42_033980 APZ42_033980 APZ42_028709 APZ42_028709 APZ42_005840 APZ42_005840 APZ42_004333 APZ42_004333 APZ42_010927 APZ42_010927 APZ42_005620 APZ42_005620 APZ42_000799 APZ42_000799 APZ42_000083 APZ42_000083 APZ42_033744 APZ42_033744 APZ42_031273 APZ42_031273 APZ42_031186 APZ42_031186 APZ42_031040 APZ42_031040 APZ42_025958 APZ42_025958 APZ42_021729 APZ42_021729 APZ42_019138 APZ42_019138 APZ42_018111 APZ42_018111 APZ42_017915 APZ42_017915 APZ42_016194 APZ42_016194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_030620Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
APZ42_019262RCC1 and BTB domain-containing protein 1. (530 aa)
APZ42_022872Putative DNA polymerase IV. (555 aa)
APZ42_011418Replication protein A 32 kDa subunit. (268 aa)
APZ42_012437Replication factor C subunit 3. (328 aa)
APZ42_032613Replication protein A 14 kDa subunit. (111 aa)
APZ42_033980Replication factor C subunit 1. (1083 aa)
APZ42_028709Meiosis-specific with OB domain-containing protein. (462 aa)
APZ42_005840Polyubiquitin-B. (124 aa)
APZ42_004333Replication factor C subunit 3. (331 aa)
APZ42_010927Replication factor C subunit 2. (288 aa)
APZ42_005620Ubiquitin-40S ribosomal protein S27a. (122 aa)
APZ42_000799DNA repair protein REV1. (121 aa)
APZ42_000083Replication factor C subunit 4. (98 aa)
APZ42_033744MAD2-like protein. (206 aa)
APZ42_031273Replication factor C subunit 2. (344 aa)
APZ42_031186CCHC-type domain-containing protein. (505 aa)
APZ42_031040Ubiquitin-60S ribosomal protein L40. (128 aa)
APZ42_025958Putative DNA repair protein REV1. (861 aa)
APZ42_021729Polyubiquitin-B. (611 aa)
APZ42_019138ATPase_AAA_core domain-containing protein. (897 aa)
APZ42_018111Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
APZ42_017915DNA polymerase. (1953 aa)
APZ42_016194Uncharacterized protein. (128 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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