Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APZ42_001774 | APZ42_004607 | A0A162CZU8 | A0A0P6INX3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.770 |
| APZ42_001774 | APZ42_005840 | A0A162CZU8 | A0A162CSN9 | Uncharacterized protein. | Polyubiquitin-B. | 0.614 |
| APZ42_001774 | APZ42_011260 | A0A162CZU8 | A0A162SIV5 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.770 |
| APZ42_001774 | APZ42_012182 | A0A162CZU8 | A0A0P4Y4S5 | Uncharacterized protein. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member. | 0.634 |
| APZ42_001774 | APZ42_013658 | A0A162CZU8 | A0A162QR19 | Uncharacterized protein. | BRCT domain-containing protein. | 0.561 |
| APZ42_001774 | APZ42_015744 | A0A162CZU8 | A0A162NA70 | Uncharacterized protein. | Ovarian-specific serine/threonine-protein kinase Lok; Belongs to the protein kinase superfamily. | 0.531 |
| APZ42_001774 | APZ42_018475 | A0A162CZU8 | A0A164Z2S1 | Uncharacterized protein. | X-ray repair cross-complementing protein 5. | 0.579 |
| APZ42_001774 | APZ42_019004 | A0A162CZU8 | A0A164YKT3 | Uncharacterized protein. | Poly [ADP-ribose] polymerase. | 0.465 |
| APZ42_001774 | APZ42_021373 | A0A162CZU8 | A0A164WQS2 | Uncharacterized protein. | DNA repair protein RAD50. | 0.421 |
| APZ42_001774 | APZ42_021729 | A0A162CZU8 | A0A164WHS6 | Uncharacterized protein. | Polyubiquitin-B. | 0.614 |
| APZ42_001774 | APZ42_023887 | A0A162CZU8 | A0A164U839 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.770 |
| APZ42_001774 | APZ42_029561 | A0A162CZU8 | A0A0P6GQ96 | Uncharacterized protein. | Small ubiquitin-related modifier 1. | 0.448 |
| APZ42_001774 | APZ42_030443 | A0A162CZU8 | A0A164NRX7 | Uncharacterized protein. | Putative Nibrin. | 0.498 |
| APZ42_001774 | APZ42_034386 | A0A162CZU8 | A0A0N8CUT7 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.550 |
| APZ42_001774 | APZ42_034515 | A0A162CZU8 | A0A164K1V3 | Uncharacterized protein. | DNA repair protein RAD50; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.421 |
| APZ42_002493 | APZ42_015088 | A0A164I8C7 | A0A0P5WDE0 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | Structure-specific endonuclease subunit SLX4. | 0.639 |
| APZ42_002493 | APZ42_015316 | A0A164I8C7 | A0A0N8CER2 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | DNA repair protein RAD51. | 0.778 |
| APZ42_002493 | APZ42_015463 | A0A164I8C7 | A0A162PHN8 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | Crossover junction endonuclease MUS81. | 0.908 |
| APZ42_002493 | APZ42_016194 | A0A164I8C7 | A0A165AJI8 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | Uncharacterized protein. | 0.844 |
| APZ42_002493 | APZ42_017973 | A0A164I8C7 | A0A0P5GQW6 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | Meiotic recombination protein DMC1/LIM15. | 0.829 |
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