STRINGSTRING
APZ42_032823 APZ42_032823 EOG090X0J86 EOG090X0J86 APZ42_031273 APZ42_031273 APZ42_031186 APZ42_031186 APZ42_031040 APZ42_031040 APZ42_030620 APZ42_030620 APZ42_030367 APZ42_030367 APZ42_030110 APZ42_030110 APZ42_029355 APZ42_029355 EOG090X09UC EOG090X09UC APZ42_028255 APZ42_028255 APZ42_027674 APZ42_027674 APZ42_027338 APZ42_027338 APZ42_026818 APZ42_026818 APZ42_026689 APZ42_026689 APZ42_026494 APZ42_026494 APZ42_021781 APZ42_021781 APZ42_019262 APZ42_019262 APZ42_017655 APZ42_017655 APZ42_022872 APZ42_022872 APZ42_024909 APZ42_024909 APZ42_017057 APZ42_017057 EOG090X0PCK EOG090X0PCK APZ42_011418 APZ42_011418 APZ42_017029 APZ42_017029 EOG090X0BPM EOG090X0BPM APZ42_012437 APZ42_012437 EOG090X0489 EOG090X0489 APZ42_026037 APZ42_026037 APZ42_022245 APZ42_022245 APZ42_032613 APZ42_032613 APZ42_026681 APZ42_026681 APZ42_033980 APZ42_033980 APZ42_014299 APZ42_014299 APZ42_028709 APZ42_028709 APZ42_018611 APZ42_018611 APZ42_012093 APZ42_012093 APZ42_020968 APZ42_020968 APZ42_028327 APZ42_028327 APZ42_014947 APZ42_014947 APZ42_017061 APZ42_017061 APZ42_011824 APZ42_011824 APZ42_022464 APZ42_022464 APZ42_002383 APZ42_002383 APZ42_022790 APZ42_022790 APZ42_022053 APZ42_022053 APZ42_005840 APZ42_005840 APZ42_004333 APZ42_004333 APZ42_028882 APZ42_028882 APZ42_023821 APZ42_023821 APZ42_004441 APZ42_004441 EOG090X080D EOG090X080D APZ42_015388 APZ42_015388 APZ42_013642 APZ42_013642 APZ42_010927 APZ42_010927 APZ42_005758 APZ42_005758 APZ42_005682 APZ42_005682 APZ42_005620 APZ42_005620 APZ42_005470 APZ42_005470 APZ42_003221 APZ42_003221 APZ42_001590 APZ42_001590 APZ42_000083 APZ42_000083 APZ42_032633 APZ42_032633 APZ42_021729 APZ42_021729 APZ42_021155 APZ42_021155 APZ42_021143 APZ42_021143 APZ42_021138 APZ42_021138 APZ42_019727 APZ42_019727 APZ42_019138 APZ42_019138 APZ42_017703 APZ42_017703 APZ42_017261 APZ42_017261 APZ42_017597 APZ42_017597 APZ42_016661 APZ42_016661 APZ42_016194 APZ42_016194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_032823DNA damage-binding protein 1. (1362 aa)
EOG090X0J86DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (127 aa)
APZ42_031273Replication factor C subunit 2. (344 aa)
APZ42_031186CCHC-type domain-containing protein. (505 aa)
APZ42_031040Ubiquitin-60S ribosomal protein L40. (128 aa)
APZ42_030620Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
APZ42_030367DNA-directed RNA polymerase. (436 aa)
APZ42_030110UV-stimulated scaffold protein A. (555 aa)
APZ42_029355DNA-directed RNA polymerase. (379 aa)
EOG090X09UCPre-mRNA-splicing factor ISY1. (286 aa)
APZ42_028255DNA-directed RNA polymerases I. (265 aa)
APZ42_027674Transcription elongation factor S-II. (260 aa)
APZ42_027338Putative CREB-binding protein. (2063 aa)
APZ42_026818General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (465 aa)
APZ42_026689General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (197 aa)
APZ42_026494DNA-directed RNA polymerases I, II, and III subunit RPABC4. (59 aa)
APZ42_021781Short transient receptor potential channel 2-like protein. (618 aa)
APZ42_019262RCC1 and BTB domain-containing protein 1. (530 aa)
APZ42_017655DNA-directed RNA polymerases I, II, and III subunit RPABC2. (129 aa)
APZ42_022872Putative DNA polymerase IV. (555 aa)
APZ42_024909PHD finger protein. (1818 aa)
APZ42_017057DUF2236 domain-containing protein. (429 aa)
EOG090X0PCKDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
APZ42_011418Replication protein A 32 kDa subunit. (268 aa)
APZ42_017029DNA excision repair protein ERCC-8. (403 aa)
EOG090X0BPMCDK-activating kinase assembly factor MAT1. (344 aa)
APZ42_012437Replication factor C subunit 3. (328 aa)
EOG090X0489Pre-mRNA-processing factor 19. (503 aa)
APZ42_026037Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (313 aa)
APZ42_022245Transcription elongation factor A N-terminal and central domain-containing protein 2. (210 aa)
APZ42_032613Replication protein A 14 kDa subunit. (111 aa)
APZ42_026681Zinc finger protein 830. (305 aa)
APZ42_033980Replication factor C subunit 1. (1083 aa)
APZ42_014299General transcription factor IIH subunit. (427 aa)
APZ42_028709Meiosis-specific with OB domain-containing protein. (462 aa)
APZ42_018611TFIIH basal transcription factor complex helicase XPD subunit. (760 aa)
APZ42_012093DNA-directed RNA polymerase II subunit RPB3. (274 aa)
APZ42_020968Protein NRDE2. (1019 aa)
APZ42_028327Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (379 aa)
APZ42_014947Pre-mRNA-splicing factor SYF1. (851 aa)
APZ42_017061DNA-directed RNA polymerase II subunit RPB7. (172 aa)
APZ42_011824Uncharacterized protein. (153 aa)
APZ42_022464DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
APZ42_002383Putative DNA-directed RNA polymerase subunit beta. (107 aa)
APZ42_022790Uncharacterized protein. (1061 aa)
APZ42_022053Intron-binding protein aquarius. (1542 aa)
APZ42_005840Polyubiquitin-B. (124 aa)
APZ42_004333Replication factor C subunit 3. (331 aa)
APZ42_028882DNA ligase. (816 aa)
APZ42_023821Ubiquitin carboxyl-terminal hydrolase. (855 aa)
APZ42_004441DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (133 aa)
EOG090X080DEOG090X080D; Belongs to the cyclin family. (328 aa)
APZ42_015388TFIIH basal transcription factor complex helicase XPB subunit. (797 aa)
APZ42_013642Uncharacterized protein. (538 aa)
APZ42_010927Replication factor C subunit 2. (288 aa)
APZ42_005758DNA-directed RNA polymerase subunit beta. (86 aa)
APZ42_005682Putative DNA-directed RNA polymerase subunit beta. (88 aa)
APZ42_005620Ubiquitin-40S ribosomal protein S27a. (122 aa)
APZ42_005470Putative DNA-directed RNA polymerase subunit beta. (120 aa)
APZ42_003221Putative DNA-directed RNA polymerase subunit beta. (107 aa)
APZ42_001590DNA damage-binding protein 1. (70 aa)
APZ42_000083Replication factor C subunit 4. (98 aa)
APZ42_032633RING-box protein 1A. (116 aa)
APZ42_021729Polyubiquitin-B. (611 aa)
APZ42_021155Uncharacterized protein. (361 aa)
APZ42_021143DNA polymerase delta subunit 3. (448 aa)
APZ42_021138General transcription factor IIH subunit 1. (567 aa)
APZ42_019727Protein partner of snf-like protein. (1907 aa)
APZ42_019138ATPase_AAA_core domain-containing protein. (897 aa)
APZ42_017703DNA-directed RNA polymerase; Belongs to the RNA polymerase beta chain family. (775 aa)
APZ42_017261Cullin-4B; Belongs to the cullin family. (781 aa)
APZ42_017597DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1454 aa)
APZ42_016661DNA excision repair ERCC-6-like protein. (1184 aa)
APZ42_016194Uncharacterized protein. (128 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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