STRINGSTRING
APZ42_023955 APZ42_023955 APZ42_028709 APZ42_028709 APZ42_013687 APZ42_013687 APZ42_015463 APZ42_015463 APZ42_005840 APZ42_005840 APZ42_021874 APZ42_021874 APZ42_015088 APZ42_015088 APZ42_023093 APZ42_023093 APZ42_022415 APZ42_022415 APZ42_022575 APZ42_022575 APZ42_018101 APZ42_018101 APZ42_017968 APZ42_017968 APZ42_016194 APZ42_016194 APZ42_020543 APZ42_020543 APZ42_021729 APZ42_021729 APZ42_025423 APZ42_025423 APZ42_028370 APZ42_028370 APZ42_030620 APZ42_030620 APZ42_031022 APZ42_031022 APZ42_031186 APZ42_031186 APZ42_031912 APZ42_031912 APZ42_001081 APZ42_001081 APZ42_001563 APZ42_001563 APZ42_005551 APZ42_005551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_023955Fanconi anemia group D2 protein. (1468 aa)
APZ42_028709Meiosis-specific with OB domain-containing protein. (462 aa)
APZ42_013687E3 ubiquitin-protein ligase FANCL. (77 aa)
APZ42_015463Crossover junction endonuclease MUS81. (636 aa)
APZ42_005840Polyubiquitin-B. (124 aa)
APZ42_021874Nuclear transport factor 2. (128 aa)
APZ42_015088Structure-specific endonuclease subunit SLX4. (1096 aa)
APZ42_023093Putative Fanconi anemia group A protein. (1198 aa)
APZ42_022415DNA cross-link repair 1A protein. (824 aa)
APZ42_022575Methyl methanesulfonate sensitivity 4. (460 aa)
APZ42_018101Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (924 aa)
APZ42_017968DRMBL domain-containing protein. (493 aa)
APZ42_016194Uncharacterized protein. (128 aa)
APZ42_020543Asparaginyl-tRNA synthetase. (560 aa)
APZ42_021729Polyubiquitin-B. (611 aa)
APZ42_025423Fanconi anemia group I protein. (995 aa)
APZ42_028370Putative Fanconi anemia core complex-associated protein 24. (193 aa)
APZ42_030620Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
APZ42_031022Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (261 aa)
APZ42_031186CCHC-type domain-containing protein. (505 aa)
APZ42_031912Putative ATP-dependent RNA helicase DHX58. (1907 aa)
APZ42_001081Fanconi anemia group I protein. (226 aa)
APZ42_001563Putative E3 ubiquitin-protein ligase FANCL. (227 aa)
APZ42_005551Centromere protein X. (89 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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