(60 nodes) Metabolism of fat-soluble vitamins network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_029605	Dehydrogenase/reductase SDR family member 12. (336 aa)
	APZ42_020058	Cral/trio domain-containing protein. (314 aa)
	APZ42_027031	Vitellogenin-1. (1546 aa)
	APZ42_020114	Alpha-tocopherol transfer-like protein. (315 aa)
	APZ42_014843	Putative Low-density lipoprotein receptor-related protein 12. (602 aa)
	APZ42_020061	Cral/trio domain-containing protein. (314 aa)
	APZ42_020066	Cral/trio domain-containing protein. (269 aa)
	APZ42_019828	Vitamin K epoxide reductase complex subunit 1 protein 1. (287 aa)
	APZ42_020056	Cral/trio domain-containing protein. (314 aa)
	APZ42_020753	Putative Alpha-tocopherol transfer protein. (151 aa)
	APZ42_018563	Aldo-keto reductase. (324 aa)
	APZ42_029562	Alpha-tocopherol transfer protein. (264 aa)
	APZ42_030615	Retinoid-and fatty acid-binding glycoprotein. (3140 aa)
	APZ42_017737	Voltage-gated potassium channel subunit beta-2. (330 aa)
	APZ42_013139	Short-chain dehydrogenase. (332 aa)
	APZ42_013142	Dehydrogenase/reductase SDR family member. (332 aa)
	APZ42_020757	Putative Alpha-tocopherol transfer protein. (258 aa)
	APZ42_020120	Cral/trio domain-containing protein. (310 aa)
	EOG090X094T	UbiA prenyltransferase domain-containing protein 1. (326 aa)
	APZ42_014593	1,5-anhydro-D-fructose reductase. (318 aa)
	APZ42_021633	All-trans-retinol 13,14-reductase. (632 aa)
	APZ42_001568	Vitellogenin domain-containing protein. (160 aa)
	APZ42_015543	1,5-anhydro-D-fructose reductase. (315 aa)
	APZ42_015554	Alcohol dehydrogenase (NADP(+)). (416 aa)
	APZ42_015156	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2. (592 aa)
	APZ42_013126	Vitellogenin domain-containing protein. (2023 aa)
	APZ42_013131	Uncharacterized protein. (2599 aa)
	APZ42_013127	Uncharacterized protein. (881 aa)
	APZ42_012836	Uncharacterized protein. (4198 aa)
	APZ42_012146	Vitellogenin domain-containing protein. (669 aa)
	APZ42_012157	VWFD domain-containing protein. (564 aa)
	APZ42_011124	Myelin P2 protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (131 aa)
	APZ42_009585	Vitellogenin domain-containing protein. (159 aa)
	APZ42_007869	Vitellogenin domain-containing protein. (381 aa)
	APZ42_007246	VWFD domain-containing protein. (143 aa)
	APZ42_003944	Vitellogenin fused with superoxide dismutase. (474 aa)
	APZ42_003122	Vitellogenin fused with superoxide dismutase. (204 aa)
	APZ42_002789	Vitellogenin domain-containing protein. (167 aa)
	APZ42_001585	Retinol dehydrogenase 12. (199 aa)
	APZ42_033983	Alcohol dehydrogenase A. (339 aa)
	APZ42_030366	Vitellogenin domain-containing protein. (734 aa)
	APZ42_030033	VWFD domain-containing protein. (630 aa)
	APZ42_029598	Retinol dehydrogenase 14. (336 aa)
	APZ42_028984	Beta,beta-carotene 15,15'-dioxygenase. (534 aa)
	APZ42_028294	Uncharacterized protein. (1392 aa)
	APZ42_027262	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)
	APZ42_026637	Retinol dehydrogenase 13. (106 aa)
	APZ42_025127	Uncharacterized protein. (1595 aa)
	APZ42_024067	Beta,beta-carotene 15,15'-dioxygenase. (600 aa)
	APZ42_023058	Dally-like protein. (206 aa)
	APZ42_022288	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (227 aa)
	APZ42_019642	Uncharacterized protein. (1539 aa)
	APZ42_019177	Clavesin-1. (263 aa)
	APZ42_018886	All-trans-retinol 13,14-reductase. (635 aa)
	APZ42_018888	Uncharacterized protein. (474 aa)
	APZ42_018566	1,5-anhydro-D-fructose reductase. (335 aa)
	APZ42_017728	Alcohol dehydrogenase A. (332 aa)
	APZ42_017729	Alcohol dehydrogenase A. (331 aa)
	APZ42_016798	Putative Agrin. (1618 aa)
	APZ42_016906	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (205 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001585	APZ42_014593	A0A164IVS5	A0A0P6FTV8	Retinol dehydrogenase 12.	1,5-anhydro-D-fructose reductase.	0.467
APZ42_001585	APZ42_015156	A0A164IVS5	A0A162P939	Retinol dehydrogenase 12.	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2.	0.535
APZ42_001585	APZ42_015543	A0A164IVS5	A0A162NV73	Retinol dehydrogenase 12.	1,5-anhydro-D-fructose reductase.	0.467
APZ42_001585	APZ42_015554	A0A164IVS5	A0A162NV82	Retinol dehydrogenase 12.	Alcohol dehydrogenase (NADP(+)).	0.467
APZ42_001585	APZ42_017728	A0A164IVS5	A0A164ZMP8	Retinol dehydrogenase 12.	Alcohol dehydrogenase A.	0.467
APZ42_001585	APZ42_017729	A0A164IVS5	A0A164ZMS8	Retinol dehydrogenase 12.	Alcohol dehydrogenase A.	0.467
APZ42_001585	APZ42_017737	A0A164IVS5	A0A0P5YA29	Retinol dehydrogenase 12.	Voltage-gated potassium channel subunit beta-2.	0.467
APZ42_001585	APZ42_018563	A0A164IVS5	A0A0P5MCW0	Retinol dehydrogenase 12.	Aldo-keto reductase.	0.467
APZ42_001585	APZ42_018566	A0A164IVS5	A0A164Z0S1	Retinol dehydrogenase 12.	1,5-anhydro-D-fructose reductase.	0.467
APZ42_001585	APZ42_018886	A0A164IVS5	A0A164YWL2	Retinol dehydrogenase 12.	All-trans-retinol 13,14-reductase.	0.762
APZ42_001585	APZ42_018888	A0A164IVS5	A0A164YWN0	Retinol dehydrogenase 12.	Uncharacterized protein.	0.762
APZ42_001585	APZ42_021633	A0A164IVS5	A0A162C9R8	Retinol dehydrogenase 12.	All-trans-retinol 13,14-reductase.	0.762
APZ42_001585	APZ42_024067	A0A164IVS5	A0A164UF70	Retinol dehydrogenase 12.	Beta,beta-carotene 15,15'-dioxygenase.	0.522
APZ42_001585	APZ42_028984	A0A164IVS5	A0A164PZL0	Retinol dehydrogenase 12.	Beta,beta-carotene 15,15'-dioxygenase.	0.522
APZ42_001585	APZ42_033983	A0A164IVS5	A0A164KJP0	Retinol dehydrogenase 12.	Alcohol dehydrogenase A.	0.467
APZ42_012836	APZ42_014843	A0A162RF19	A0A0N8DA98	Uncharacterized protein.	Putative Low-density lipoprotein receptor-related protein 12.	0.430
APZ42_012836	APZ42_023058	A0A162RF19	A0A164V945	Uncharacterized protein.	Dally-like protein.	0.496
APZ42_013126	APZ42_013127	A0A162R1N3	A0A162R1S5	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.934
APZ42_013126	APZ42_014843	A0A162R1N3	A0A0N8DA98	Vitellogenin domain-containing protein.	Putative Low-density lipoprotein receptor-related protein 12.	0.430
APZ42_013126	APZ42_023058	A0A162R1N3	A0A164V945	Vitellogenin domain-containing protein.	Dally-like protein.	0.496