(6 nodes) Eukaryotic Translation Termination network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_012476	Acylamino-acid-releasing enzyme. (370 aa)
	APZ42_021169	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. (583 aa)
	APZ42_013553	Eukaryotic peptide chain release factor subunit 1. (438 aa)
	EOG090X0LTV	Multifunctional methyltransferase subunit TRM112-like protein. (124 aa)
	APZ42_018525	Acylamino-acid-releasing enzyme. (276 aa)
	APZ42_017406	HemK methyltransferase family member 2. (218 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012476	APZ42_018525	A0A162RVZ6	A0A164Z1N4	Acylamino-acid-releasing enzyme.	Acylamino-acid-releasing enzyme.	0.490
APZ42_013553	APZ42_017406	A0A162QLT7	A0A164ZV48	Eukaryotic peptide chain release factor subunit 1.	HemK methyltransferase family member 2.	0.881
APZ42_013553	APZ42_021169	A0A162QLT7	A0A0P5VGK3	Eukaryotic peptide chain release factor subunit 1.	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	0.999
APZ42_013553	EOG090X0LTV	A0A162QLT7	A0A162SW91	Eukaryotic peptide chain release factor subunit 1.	Multifunctional methyltransferase subunit TRM112-like protein.	0.866
APZ42_017406	APZ42_013553	A0A164ZV48	A0A162QLT7	HemK methyltransferase family member 2.	Eukaryotic peptide chain release factor subunit 1.	0.881
APZ42_017406	APZ42_021169	A0A164ZV48	A0A0P5VGK3	HemK methyltransferase family member 2.	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	0.739
APZ42_017406	EOG090X0LTV	A0A164ZV48	A0A162SW91	HemK methyltransferase family member 2.	Multifunctional methyltransferase subunit TRM112-like protein.	0.999
APZ42_018525	APZ42_012476	A0A164Z1N4	A0A162RVZ6	Acylamino-acid-releasing enzyme.	Acylamino-acid-releasing enzyme.	0.490
APZ42_021169	APZ42_013553	A0A0P5VGK3	A0A162QLT7	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	Eukaryotic peptide chain release factor subunit 1.	0.999
APZ42_021169	APZ42_017406	A0A0P5VGK3	A0A164ZV48	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	HemK methyltransferase family member 2.	0.739
APZ42_021169	EOG090X0LTV	A0A0P5VGK3	A0A162SW91	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	Multifunctional methyltransferase subunit TRM112-like protein.	0.699
EOG090X0LTV	APZ42_013553	A0A162SW91	A0A162QLT7	Multifunctional methyltransferase subunit TRM112-like protein.	Eukaryotic peptide chain release factor subunit 1.	0.866
EOG090X0LTV	APZ42_017406	A0A162SW91	A0A164ZV48	Multifunctional methyltransferase subunit TRM112-like protein.	HemK methyltransferase family member 2.	0.999
EOG090X0LTV	APZ42_021169	A0A162SW91	A0A0P5VGK3	Multifunctional methyltransferase subunit TRM112-like protein.	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.	0.699