(20 nodes) Signaling by PTK6 network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_012615	Rho-related GTP-binding protein RhoF. (223 aa)
	APZ42_015618	Putative E3 ubiquitin-protein ligase CBL-B. (544 aa)
	APZ42_005840	Polyubiquitin-B. (124 aa)
	APZ42_005620	Ubiquitin-40S ribosomal protein S27a. (122 aa)
	APZ42_004669	Ras GTP-binding protein Rho1. (41 aa)
	APZ42_033871	Leucine-rich repeat kinase. (2541 aa)
	APZ42_033772	Putative Paxillin. (273 aa)
	APZ42_031040	Ubiquitin-60S ribosomal protein L40. (128 aa)
	APZ42_023578	Dedicator of cytokinesis protein 5; Belongs to the DOCK family. (2046 aa)
	APZ42_016749	Cold shock domain-containing protein E1. (942 aa)
	APZ42_017454	Cytokine-inducible SH2-containing protein. (483 aa)
	APZ42_019140	Paxillin. (204 aa)
	APZ42_020023	ELMO domain-containing protein. (269 aa)
	APZ42_021729	Polyubiquitin-B. (611 aa)
	APZ42_023437	Rho GTPase-activating protein 190. (1393 aa)
	EOG090X0AMT	ELMO domain-containing protein 2. (332 aa)
	APZ42_018132	Ras protein 1. (190 aa)
	APZ42_026058	KH domain-containing protein. (472 aa)
	EOG090X02BW	Engulfment and cell motility protein 3. (736 aa)
	APZ42_011760	Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide. (952 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_004669	APZ42_005620	A0A164GWT3	A0A164GCP6	Ras GTP-binding protein Rho1.	Ubiquitin-40S ribosomal protein S27a.	0.722
APZ42_004669	APZ42_005840	A0A164GWT3	A0A162CSN9	Ras GTP-binding protein Rho1.	Polyubiquitin-B.	0.675
APZ42_004669	APZ42_011760	A0A164GWT3	A0A0P5KQF9	Ras GTP-binding protein Rho1.	Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide.	0.699
APZ42_004669	APZ42_015618	A0A164GWT3	A0A0P5CJL7	Ras GTP-binding protein Rho1.	Putative E3 ubiquitin-protein ligase CBL-B.	0.606
APZ42_004669	APZ42_016749	A0A164GWT3	A0A165A4R9	Ras GTP-binding protein Rho1.	Cold shock domain-containing protein E1.	0.703
APZ42_004669	APZ42_018132	A0A164GWT3	A0A0P5XLP0	Ras GTP-binding protein Rho1.	Ras protein 1.	0.703
APZ42_004669	APZ42_019140	A0A164GWT3	A0A164YJJ1	Ras GTP-binding protein Rho1.	Paxillin.	0.768
APZ42_004669	APZ42_021729	A0A164GWT3	A0A164WHS6	Ras GTP-binding protein Rho1.	Polyubiquitin-B.	0.675
APZ42_004669	APZ42_023437	A0A164GWT3	A0A164UWM5	Ras GTP-binding protein Rho1.	Rho GTPase-activating protein 190.	0.937
APZ42_004669	APZ42_023578	A0A164GWT3	A0A164UU79	Ras GTP-binding protein Rho1.	Dedicator of cytokinesis protein 5; Belongs to the DOCK family.	0.805
APZ42_004669	APZ42_031040	A0A164GWT3	A0A164N724	Ras GTP-binding protein Rho1.	Ubiquitin-60S ribosomal protein L40.	0.706
APZ42_004669	APZ42_033772	A0A164GWT3	A0A164KVJ4	Ras GTP-binding protein Rho1.	Putative Paxillin.	0.768
APZ42_004669	APZ42_033871	A0A164GWT3	A0A164KNT3	Ras GTP-binding protein Rho1.	Leucine-rich repeat kinase.	0.904
APZ42_004669	EOG090X02BW	A0A164GWT3	A0A0P5KTU8	Ras GTP-binding protein Rho1.	Engulfment and cell motility protein 3.	0.812
APZ42_005620	APZ42_004669	A0A164GCP6	A0A164GWT3	Ubiquitin-40S ribosomal protein S27a.	Ras GTP-binding protein Rho1.	0.722
APZ42_005620	APZ42_005840	A0A164GCP6	A0A162CSN9	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-B.	0.979
APZ42_005620	APZ42_012615	A0A164GCP6	A0A0P5KP21	Ubiquitin-40S ribosomal protein S27a.	Rho-related GTP-binding protein RhoF.	0.722
APZ42_005620	APZ42_015618	A0A164GCP6	A0A0P5CJL7	Ubiquitin-40S ribosomal protein S27a.	Putative E3 ubiquitin-protein ligase CBL-B.	0.949
APZ42_005620	APZ42_016749	A0A164GCP6	A0A165A4R9	Ubiquitin-40S ribosomal protein S27a.	Cold shock domain-containing protein E1.	0.694
APZ42_005620	APZ42_018132	A0A164GCP6	A0A0P5XLP0	Ubiquitin-40S ribosomal protein S27a.	Ras protein 1.	0.694