(19 nodes) Calnexin/calreticulin cycle network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	APZ42_026852	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (594 aa)
	APZ42_028157	Calnexin. (588 aa)
	APZ42_026549	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (594 aa)
	APZ42_023702	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (962 aa)
	APZ42_021729	Polyubiquitin-B. (611 aa)
	APZ42_018786	E3 ubiquitin-protein ligase MARCH2. (646 aa)
	APZ42_018479	E3 ubiquitin-protein ligase MARCH6. (930 aa)
	APZ42_028779	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (614 aa)
	APZ42_011342	E3 ubiquitin-protein ligase RNF139. (684 aa)
	APZ42_031040	Ubiquitin-60S ribosomal protein L40. (128 aa)
	EOG090X0DX7	Putative E3 ubiquitin-protein ligase MARCH8. (360 aa)
	APZ42_005620	Ubiquitin-40S ribosomal protein S27a. (122 aa)
	APZ42_005840	Polyubiquitin-B. (124 aa)
	APZ42_020149	Calreticulin. (409 aa)
	EOG090X0438	Protein disulfide-isomerase. (489 aa)
	APZ42_022421	Putative E3 ubiquitin-protein ligase MARCH1. (203 aa)
	APZ42_030957	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (1066 aa)
	APZ42_024557	E3 ubiquitin-protein ligase RNF103. (435 aa)
	APZ42_024577	UDP-glucose:glycoprotein glucosyltransferase. (1508 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_005620	APZ42_005840	A0A164GCP6	A0A162CSN9	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-B.	0.979
APZ42_005620	APZ42_011342	A0A164GCP6	A0A0P5DXJ9	Ubiquitin-40S ribosomal protein S27a.	E3 ubiquitin-protein ligase RNF139.	0.810
APZ42_005620	APZ42_020149	A0A164GCP6	A0A0P6EVW0	Ubiquitin-40S ribosomal protein S27a.	Calreticulin.	0.508
APZ42_005620	APZ42_021729	A0A164GCP6	A0A164WHS6	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-B.	0.978
APZ42_005620	APZ42_024557	A0A164GCP6	A0A0P5Z871	Ubiquitin-40S ribosomal protein S27a.	E3 ubiquitin-protein ligase RNF103.	0.823
APZ42_005620	APZ42_031040	A0A164GCP6	A0A164N724	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.999
APZ42_005840	APZ42_005620	A0A162CSN9	A0A164GCP6	Polyubiquitin-B.	Ubiquitin-40S ribosomal protein S27a.	0.979
APZ42_005840	APZ42_011342	A0A162CSN9	A0A0P5DXJ9	Polyubiquitin-B.	E3 ubiquitin-protein ligase RNF139.	0.733
APZ42_005840	APZ42_020149	A0A162CSN9	A0A0P6EVW0	Polyubiquitin-B.	Calreticulin.	0.511
APZ42_005840	APZ42_021729	A0A162CSN9	A0A164WHS6	Polyubiquitin-B.	Polyubiquitin-B.	0.900
APZ42_005840	APZ42_024557	A0A162CSN9	A0A0P5Z871	Polyubiquitin-B.	E3 ubiquitin-protein ligase RNF103.	0.720
APZ42_005840	APZ42_031040	A0A162CSN9	A0A164N724	Polyubiquitin-B.	Ubiquitin-60S ribosomal protein L40.	0.998
APZ42_011342	APZ42_005620	A0A0P5DXJ9	A0A164GCP6	E3 ubiquitin-protein ligase RNF139.	Ubiquitin-40S ribosomal protein S27a.	0.810
APZ42_011342	APZ42_005840	A0A0P5DXJ9	A0A162CSN9	E3 ubiquitin-protein ligase RNF139.	Polyubiquitin-B.	0.733
APZ42_011342	APZ42_018479	A0A0P5DXJ9	A0A0P5QJ04	E3 ubiquitin-protein ligase RNF139.	E3 ubiquitin-protein ligase MARCH6.	0.673
APZ42_011342	APZ42_018786	A0A0P5DXJ9	A0A164YTE0	E3 ubiquitin-protein ligase RNF139.	E3 ubiquitin-protein ligase MARCH2.	0.469
APZ42_011342	APZ42_021729	A0A0P5DXJ9	A0A164WHS6	E3 ubiquitin-protein ligase RNF139.	Polyubiquitin-B.	0.733
APZ42_011342	APZ42_022421	A0A0P5DXJ9	A0A0P6CS69	E3 ubiquitin-protein ligase RNF139.	Putative E3 ubiquitin-protein ligase MARCH1.	0.469
APZ42_011342	APZ42_031040	A0A0P5DXJ9	A0A164N724	E3 ubiquitin-protein ligase RNF139.	Ubiquitin-60S ribosomal protein L40.	0.777
APZ42_011342	EOG090X0DX7	A0A0P5DXJ9	A0A0P5DTQ0	E3 ubiquitin-protein ligase RNF139.	Putative E3 ubiquitin-protein ligase MARCH8.	0.469