(37 nodes) Postmitotic nuclear pore complex (NPC) reformation network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_034528	Uncharacterized protein. (291 aa)
	APZ42_000930	Nuclear pore complex protein Nup155. (248 aa)
	APZ42_005062	Uncharacterized protein. (100 aa)
	APZ42_007055	Nuclear pore complex protein Nup155. (121 aa)
	APZ42_008452	Uncharacterized protein. (236 aa)
	APZ42_011717	Methuselah 15-like protein. (1681 aa)
	APZ42_013510	Nuclear pore complex protein Nup155. (224 aa)
	APZ42_026180	Nucleoporin Nup37. (320 aa)
	APZ42_010954	Class b secretin g-protein coupled receptor gprmth4. (884 aa)
	APZ42_023172	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (642 aa)
	APZ42_021151	Uncharacterized protein. (282 aa)
	APZ42_018104	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
	APZ42_026626	Regulator of chromosome condensation. (621 aa)
	APZ42_022227	Nuclear pore complex protein Nup98-Nup96. (1843 aa)
	APZ42_027195	Uncharacterized protein. (746 aa)
	APZ42_015305	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family. (363 aa)
	APZ42_023545	Uncharacterized protein. (554 aa)
	APZ42_022409	Nuclear pore complex protein Nup133. (1116 aa)
	APZ42_011039	Ran GTPase-activating protein 1. (591 aa)
	APZ42_029561	Small ubiquitin-related modifier 1. (129 aa)
	APZ42_015077	Nuclear pore protein. (825 aa)
	APZ42_000921	Nuclear pore complex protein Nup155. (202 aa)
	EOG090X07N7	SEC13 protein; Belongs to the WD repeat SEC13 family. (311 aa)
	APZ42_014494	WD_REPEATS_REGION domain-containing protein. (202 aa)
	APZ42_013766	Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
	APZ42_014107	Uncharacterized protein. (442 aa)
	APZ42_016953	Putative Nucleoporin NDC1. (311 aa)
	APZ42_020437	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (177 aa)
	APZ42_024881	Uncharacterized protein. (312 aa)
	APZ42_026406	Nucleoporin 154kD, isoform A. (338 aa)
	APZ42_026545	Nuclear pore complex protein Nup155. (588 aa)
	APZ42_026668	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (915 aa)
	APZ42_027333	Nuclear pore complex protein Nup205. (1838 aa)
	APZ42_029635	Uncharacterized protein. (361 aa)
	APZ42_030202	Putative Nuclear pore complex protein Nup98-Nup96. (155 aa)
	APZ42_030621	Nuclear pore complex protein Nup160. (1379 aa)
	APZ42_031801	MULE domain-containing protein. (612 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000921	APZ42_000930	A0A162C8L9	A0A164JAB6	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.578
APZ42_000921	APZ42_007055	A0A162C8L9	A0A164FJF0	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.467
APZ42_000921	APZ42_010954	A0A162C8L9	A0A0N8CKR5	Nuclear pore complex protein Nup155.	Class b secretin g-protein coupled receptor gprmth4.	0.525
APZ42_000921	APZ42_011039	A0A162C8L9	A0A0P6A080	Nuclear pore complex protein Nup155.	Ran GTPase-activating protein 1.	0.746
APZ42_000921	APZ42_011717	A0A162C8L9	A0A162SYR7	Nuclear pore complex protein Nup155.	Methuselah 15-like protein.	0.525
APZ42_000921	APZ42_013766	A0A162C8L9	A0A162QIP0	Nuclear pore complex protein Nup155.	Putative Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_014494	A0A162C8L9	A0A162PTB8	Nuclear pore complex protein Nup155.	WD_REPEATS_REGION domain-containing protein.	0.892
APZ42_000921	APZ42_015077	A0A162C8L9	A0A0P6GRK8	Nuclear pore complex protein Nup155.	Nuclear pore protein.	0.923
APZ42_000921	APZ42_015305	A0A162C8L9	A0A0P5X6F0	Nuclear pore complex protein Nup155.	Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.	0.907
APZ42_000921	APZ42_016953	A0A162C8L9	A0A165A9R2	Nuclear pore complex protein Nup155.	Putative Nucleoporin NDC1.	0.881
APZ42_000921	APZ42_018104	A0A162C8L9	A0A0P5DW53	Nuclear pore complex protein Nup155.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.935
APZ42_000921	APZ42_020437	A0A162C8L9	A0A164XI82	Nuclear pore complex protein Nup155.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.606
APZ42_000921	APZ42_021151	A0A162C8L9	A0A0P5D433	Nuclear pore complex protein Nup155.	Uncharacterized protein.	0.805
APZ42_000921	APZ42_022227	A0A162C8L9	A0A0P5EGA2	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_022409	A0A162C8L9	A0A0P5YWY4	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup133.	0.915
APZ42_000921	APZ42_023172	A0A162C8L9	A0A0N8CSH8	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.907
APZ42_000921	APZ42_026180	A0A162C8L9	A0A0N8CH87	Nuclear pore complex protein Nup155.	Nucleoporin Nup37.	0.872
APZ42_000921	APZ42_026406	A0A162C8L9	A0A164S642	Nuclear pore complex protein Nup155.	Nucleoporin 154kD, isoform A.	0.497
APZ42_000921	APZ42_026668	A0A162C8L9	A0A164S396	Nuclear pore complex protein Nup155.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.913
APZ42_000921	APZ42_027333	A0A162C8L9	A0A164RHK2	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup205.	0.952