(16 nodes) Transposase network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_013747	Uncharacterized protein. (283 aa)
	APZ42_003437	Uncharacterized protein. (369 aa)
	APZ42_007564	Uncharacterized protein. (334 aa)
	APZ42_009631	HTH_Tnp_Tc3_2 domain-containing protein. (84 aa)
	APZ42_008587	Uncharacterized protein. (244 aa)
	APZ42_008116	HTH_Tnp_Tc3_2 domain-containing protein. (79 aa)
	APZ42_007733	HTH_Tnp_Tc3_2 domain-containing protein. (80 aa)
	APZ42_001589	Uncharacterized protein. (130 aa)
	APZ42_001448	HTH_Tnp_Tc3_2 domain-containing protein. (254 aa)
	APZ42_000054	HTH_Tnp_Tc3_2 domain-containing protein. (155 aa)
	APZ42_034023	HTH_Tnp_Tc3_2 domain-containing protein. (557 aa)
	APZ42_033557	Uncharacterized protein. (769 aa)
	APZ42_031439	HTH_Tnp_Tc3_2 domain-containing protein. (157 aa)
	APZ42_030183	Uncharacterized protein. (332 aa)
	APZ42_029028	TE: Transposable element Tcb1 Transposase. (348 aa)
	APZ42_023179	Uncharacterized protein. (298 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000054	APZ42_007733	A0A164JY82	A0A164F4E6	HTH_Tnp_Tc3_2 domain-containing protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.506
APZ42_000054	APZ42_008116	A0A164JY82	A0A164EV39	HTH_Tnp_Tc3_2 domain-containing protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.506
APZ42_000054	APZ42_030183	A0A164JY82	A0A164P016	HTH_Tnp_Tc3_2 domain-containing protein.	Uncharacterized protein.	0.430
APZ42_001448	APZ42_007733	A0A164IZA9	A0A164F4E6	HTH_Tnp_Tc3_2 domain-containing protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.647
APZ42_001448	APZ42_008116	A0A164IZA9	A0A164EV39	HTH_Tnp_Tc3_2 domain-containing protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.641
APZ42_001448	APZ42_008587	A0A164IZA9	A0A164EJG8	HTH_Tnp_Tc3_2 domain-containing protein.	Uncharacterized protein.	0.440
APZ42_001448	APZ42_013747	A0A164IZA9	A0A162QJC5	HTH_Tnp_Tc3_2 domain-containing protein.	Uncharacterized protein.	0.439
APZ42_001448	APZ42_023179	A0A164IZA9	A0A164V5Y9	HTH_Tnp_Tc3_2 domain-containing protein.	Uncharacterized protein.	0.443
APZ42_001448	APZ42_029028	A0A164IZA9	A0A164PZA7	HTH_Tnp_Tc3_2 domain-containing protein.	TE: Transposable element Tcb1 Transposase.	0.441
APZ42_001448	APZ42_030183	A0A164IZA9	A0A164P016	HTH_Tnp_Tc3_2 domain-containing protein.	Uncharacterized protein.	0.440
APZ42_003437	APZ42_007733	A0A162CWW4	A0A164F4E6	Uncharacterized protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.603
APZ42_003437	APZ42_008116	A0A162CWW4	A0A164EV39	Uncharacterized protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.593
APZ42_003437	APZ42_013747	A0A162CWW4	A0A162QJC5	Uncharacterized protein.	Uncharacterized protein.	0.414
APZ42_003437	APZ42_023179	A0A162CWW4	A0A164V5Y9	Uncharacterized protein.	Uncharacterized protein.	0.408
APZ42_003437	APZ42_029028	A0A162CWW4	A0A164PZA7	Uncharacterized protein.	TE: Transposable element Tcb1 Transposase.	0.423
APZ42_003437	APZ42_030183	A0A162CWW4	A0A164P016	Uncharacterized protein.	Uncharacterized protein.	0.415
APZ42_007564	APZ42_007733	A0A162D1T0	A0A164F4E6	Uncharacterized protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.609
APZ42_007564	APZ42_008116	A0A162D1T0	A0A164EV39	Uncharacterized protein.	HTH_Tnp_Tc3_2 domain-containing protein.	0.600
APZ42_007564	APZ42_008587	A0A162D1T0	A0A164EJG8	Uncharacterized protein.	Uncharacterized protein.	0.401
APZ42_007564	APZ42_013747	A0A162D1T0	A0A162QJC5	Uncharacterized protein.	Uncharacterized protein.	0.423