(18 nodes) Endonuclease/Exonuclease/phosphatase family network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_024555	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (413 aa)
	APZ42_016108	Neutral sphingomyelinase. (390 aa)
	APZ42_021848	Sphingomyelin phosphodiesterase 3. (467 aa)
	APZ42_027841	Uncharacterized protein. (501 aa)
	APZ42_027310	Glucose-repressible alcohol dehydrogenase. (365 aa)
	APZ42_025484	Endo/exonuclease/phosphatase domain-containing protein. (525 aa)
	APZ42_021901	CCR4-NOT transcription complex subunit 6. (461 aa)
	APZ42_029899	Uncharacterized protein. (1226 aa)
	APZ42_033928	Uncharacterized protein. (1807 aa)
	APZ42_001911	Endo/exonuclease/phosphatase domain-containing protein. (183 aa)
	APZ42_003474	Endo/exonuclease/phosphatase domain-containing protein. (522 aa)
	APZ42_004955	Endo/exonuclease/phosphatase domain-containing protein. (210 aa)
	APZ42_009177	Endo/exonuclease/phosphatase domain-containing protein. (241 aa)
	APZ42_011389	Tyrosyl-DNA phosphodiesterase 2. (358 aa)
	APZ42_026196	Uncharacterized protein. (1798 aa)
	APZ42_026588	Uncharacterized protein. (1660 aa)
	APZ42_001557	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (327 aa)
	APZ42_014605	2',5'-phosphodiesterase 12. (596 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001557	APZ42_024555	A0A162C7E5	A0A164TZ25	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	0.794
APZ42_016108	APZ42_021848	A0A0P5E581	A0A0N8B0A6	Neutral sphingomyelinase.	Sphingomyelin phosphodiesterase 3.	0.880
APZ42_021848	APZ42_016108	A0A0N8B0A6	A0A0P5E581	Sphingomyelin phosphodiesterase 3.	Neutral sphingomyelinase.	0.880
APZ42_024555	APZ42_001557	A0A164TZ25	A0A162C7E5	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	0.794
APZ42_026196	APZ42_026588	A0A162EDT1	A0A162ED23	Uncharacterized protein.	Uncharacterized protein.	0.485
APZ42_026196	APZ42_029899	A0A162EDT1	A0A164P7T6	Uncharacterized protein.	Uncharacterized protein.	0.494
APZ42_026588	APZ42_026196	A0A162ED23	A0A162EDT1	Uncharacterized protein.	Uncharacterized protein.	0.485
APZ42_026588	APZ42_029899	A0A162ED23	A0A164P7T6	Uncharacterized protein.	Uncharacterized protein.	0.426
APZ42_029899	APZ42_026196	A0A164P7T6	A0A162EDT1	Uncharacterized protein.	Uncharacterized protein.	0.494
APZ42_029899	APZ42_026588	A0A164P7T6	A0A162ED23	Uncharacterized protein.	Uncharacterized protein.	0.426