(4 nodes) Sec23/Sec24 trunk domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_033286	Protein transport protein Sec24C. (1058 aa)
	APZ42_019750	Transport Sec24B,-like protein. (400 aa)
	APZ42_013796	Uncharacterized protein. (1206 aa)
	APZ42_030563	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (803 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_013796	APZ42_019750	A0A162QFE9	A0A162CM36	Uncharacterized protein.	Transport Sec24B,-like protein.	0.413
APZ42_013796	APZ42_030563	A0A162QFE9	A0A0P5E3T1	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.991
APZ42_013796	APZ42_033286	A0A162QFE9	A0A164L8C2	Uncharacterized protein.	Protein transport protein Sec24C.	0.980
APZ42_019750	APZ42_013796	A0A162CM36	A0A162QFE9	Transport Sec24B,-like protein.	Uncharacterized protein.	0.413
APZ42_019750	APZ42_030563	A0A162CM36	A0A0P5E3T1	Transport Sec24B,-like protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.991
APZ42_019750	APZ42_033286	A0A162CM36	A0A164L8C2	Transport Sec24B,-like protein.	Protein transport protein Sec24C.	0.980
APZ42_030563	APZ42_013796	A0A0P5E3T1	A0A162QFE9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.991
APZ42_030563	APZ42_019750	A0A0P5E3T1	A0A162CM36	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Transport Sec24B,-like protein.	0.991
APZ42_030563	APZ42_033286	A0A0P5E3T1	A0A164L8C2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein Sec24C.	0.999
APZ42_033286	APZ42_013796	A0A164L8C2	A0A162QFE9	Protein transport protein Sec24C.	Uncharacterized protein.	0.980
APZ42_033286	APZ42_019750	A0A164L8C2	A0A162CM36	Protein transport protein Sec24C.	Transport Sec24B,-like protein.	0.980
APZ42_033286	APZ42_030563	A0A164L8C2	A0A0P5E3T1	Protein transport protein Sec24C.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999