(16 nodes) Low-density lipoprotein-receptor YWTD domain network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016046	Low-density lipoprotein receptor ldl. (489 aa)
	APZ42_024105	Low-density lipoprotein receptor-related protein 2. (4941 aa)
	APZ42_024115	Low-density lipoprotein receptor-related protein 2. (1403 aa)
	APZ42_028941	Low-density lipoprotein receptor-related protein 2. (4788 aa)
	APZ42_030649	Sortilin-related receptor. (2218 aa)
	APZ42_032505	Low-density lipoprotein receptor-related protein 6. (2064 aa)
	APZ42_034371	Vitellogenin receptor. (1763 aa)
	APZ42_001817	Low-density lipoprotein receptor-related protein 2. (214 aa)
	APZ42_010850	Putative Vitellogenin receptor. (1351 aa)
	APZ42_016053	EGF-like domain-containing protein. (806 aa)
	APZ42_016050	Uncharacterized protein. (378 aa)
	APZ42_015933	Protein cueball. (519 aa)
	APZ42_018129	Tyrosine-protein kinase receptor. (2351 aa)
	APZ42_013793	Nidogen-1. (1370 aa)
	APZ42_025753	Low-density lipoprotein receptor-related protein 6. (1758 aa)
	APZ42_034126	Very Low-density lipoprotein receptor. (887 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001817	APZ42_010850	A0A164IQA7	A0A162T8L4	Low-density lipoprotein receptor-related protein 2.	Putative Vitellogenin receptor.	0.624
APZ42_001817	APZ42_018129	A0A164IQA7	A0A162CIF0	Low-density lipoprotein receptor-related protein 2.	Tyrosine-protein kinase receptor.	0.488
APZ42_001817	APZ42_024105	A0A164IQA7	A0A164UH83	Low-density lipoprotein receptor-related protein 2.	Low-density lipoprotein receptor-related protein 2.	0.903
APZ42_001817	APZ42_024115	A0A164IQA7	A0A164UH25	Low-density lipoprotein receptor-related protein 2.	Low-density lipoprotein receptor-related protein 2.	0.569
APZ42_001817	APZ42_025753	A0A164IQA7	A0A0P4YGB1	Low-density lipoprotein receptor-related protein 2.	Low-density lipoprotein receptor-related protein 6.	0.617
APZ42_001817	APZ42_034371	A0A164IQA7	A0A164K5K2	Low-density lipoprotein receptor-related protein 2.	Vitellogenin receptor.	0.659
APZ42_010850	APZ42_001817	A0A162T8L4	A0A164IQA7	Putative Vitellogenin receptor.	Low-density lipoprotein receptor-related protein 2.	0.624
APZ42_010850	APZ42_018129	A0A162T8L4	A0A162CIF0	Putative Vitellogenin receptor.	Tyrosine-protein kinase receptor.	0.488
APZ42_010850	APZ42_024105	A0A162T8L4	A0A164UH83	Putative Vitellogenin receptor.	Low-density lipoprotein receptor-related protein 2.	0.552
APZ42_010850	APZ42_028941	A0A162T8L4	A0A164Q3Q6	Putative Vitellogenin receptor.	Low-density lipoprotein receptor-related protein 2.	0.517
APZ42_010850	APZ42_034126	A0A162T8L4	A0A0P4Y376	Putative Vitellogenin receptor.	Very Low-density lipoprotein receptor.	0.517
APZ42_015933	APZ42_018129	A0A162NGN8	A0A162CIF0	Protein cueball.	Tyrosine-protein kinase receptor.	0.488
APZ42_016046	APZ42_018129	A0A0P5BBV3	A0A162CIF0	Low-density lipoprotein receptor ldl.	Tyrosine-protein kinase receptor.	0.488
APZ42_016050	APZ42_018129	A0A162NKP2	A0A162CIF0	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.488
APZ42_016053	APZ42_018129	A0A162NKR5	A0A162CIF0	EGF-like domain-containing protein.	Tyrosine-protein kinase receptor.	0.488
APZ42_018129	APZ42_001817	A0A162CIF0	A0A164IQA7	Tyrosine-protein kinase receptor.	Low-density lipoprotein receptor-related protein 2.	0.488
APZ42_018129	APZ42_010850	A0A162CIF0	A0A162T8L4	Tyrosine-protein kinase receptor.	Putative Vitellogenin receptor.	0.488
APZ42_018129	APZ42_015933	A0A162CIF0	A0A162NGN8	Tyrosine-protein kinase receptor.	Protein cueball.	0.488
APZ42_018129	APZ42_016046	A0A162CIF0	A0A0P5BBV3	Tyrosine-protein kinase receptor.	Low-density lipoprotein receptor ldl.	0.488
APZ42_018129	APZ42_016050	A0A162CIF0	A0A162NKP2	Tyrosine-protein kinase receptor.	Uncharacterized protein.	0.488