STRINGSTRING
APZ42_016345 APZ42_016345 APZ42_003067 APZ42_003067 APZ42_012180 APZ42_012180 APZ42_012859 APZ42_012859 APZ42_032905 APZ42_032905 APZ42_019143 APZ42_019143 APZ42_032889 APZ42_032889
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_016345Aspartate aminotransferase. (430 aa)
APZ42_003067Putative Phospho-2-dehydro-3-deoxyheptonate aldolase. (103 aa)
APZ42_012180Aspartate aminotransferase. (411 aa)
APZ42_012859Uncharacterized protein. (365 aa)
APZ42_032905Tryptophan 5-hydroxylase 2. (445 aa)
APZ42_019143Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (456 aa)
APZ42_032889Putative Tryptophan. (299 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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