STRINGSTRING
APZ42_029507 APZ42_029507 APZ42_020554 APZ42_020554 APZ42_028796 APZ42_028796 APZ42_018674 APZ42_018674 APZ42_029496 APZ42_029496 APZ42_030800 APZ42_030800 APZ42_030708 APZ42_030708 APZ42_019326 APZ42_019326 APZ42_013701 APZ42_013701 EOG090X08PK EOG090X08PK APZ42_020193 APZ42_020193 APZ42_034085 APZ42_034085 APZ42_022622 APZ42_022622 APZ42_012378 APZ42_012378 APZ42_021470 APZ42_021470 APZ42_012434 APZ42_012434 APZ42_019398 APZ42_019398 APZ42_011829 APZ42_011829 APZ42_007270 APZ42_007270 APZ42_015953 APZ42_015953 APZ42_013998 APZ42_013998 APZ42_012464 APZ42_012464 APZ42_012465 APZ42_012465 APZ42_011001 APZ42_011001 APZ42_010900 APZ42_010900 APZ42_031384 APZ42_031384 APZ42_029824 APZ42_029824 APZ42_029508 APZ42_029508 APZ42_028782 APZ42_028782 APZ42_028799 APZ42_028799 APZ42_026040 APZ42_026040 APZ42_025328 APZ42_025328 APZ42_023507 APZ42_023507 APZ42_021140 APZ42_021140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_029507Geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (390 aa)
APZ42_020554Dehydrogenase/reductase SDR family member 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)
APZ42_028796Geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (314 aa)
APZ42_018674Prenylcysteine oxidase 1. (479 aa)
APZ42_0294963-hydroxy-3-methylglutaryl coenzyme A reductase. (868 aa)
APZ42_030800Metalloendopeptidase OMA1, mitochondrial. (417 aa)
APZ42_030708Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (309 aa)
APZ42_019326Uncharacterized protein. (540 aa)
APZ42_013701Phosphomevalonate kinase. (190 aa)
EOG090X08PKFarnesyltransferase/geranylgeranyltransferase type-1 subunit alpha protein. (332 aa)
APZ42_020193Protein Churchill. (112 aa)
APZ42_034085CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (445 aa)
APZ42_022622Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
APZ42_012378Acetyl-CoA acetyltransferase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family. (501 aa)
APZ42_021470Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (532 aa)
APZ42_012434Solute carrier family 35 member F1. (571 aa)
APZ42_019398Myc box-dependent-interacting protein. (1195 aa)
APZ42_011829Nogo-B receptor. (272 aa)
APZ42_007270Hydroxymethylglutaryl-CoA synthase 1. (45 aa)
APZ42_015953Isopentenyl-diphosphate Delta-isomerase 1. (222 aa)
APZ42_013998CAAX prenyl protease 2. (278 aa)
APZ42_012464Putative RNA-binding protein 38; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1283 aa)
APZ42_012465Mitochondrial import receptor subunit TOM70. (593 aa)
APZ42_011001Uncharacterized protein. (289 aa)
APZ42_010900RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (820 aa)
APZ42_031384Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (347 aa)
APZ42_029824Protein-S-isoprenylcysteine O-methyltransferase. (314 aa)
APZ42_029508Decaprenyl-diphosphate synthase subunit; Belongs to the FPP/GGPP synthase family. (390 aa)
APZ42_028782Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family. (332 aa)
APZ42_028799Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family. (328 aa)
APZ42_026040Alkyl transferase; Belongs to the UPP synthase family. (298 aa)
APZ42_025328Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (509 aa)
APZ42_0235073-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (351 aa)
APZ42_021140Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (381 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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