(35 nodes) Two-component system network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_012430	Solute carrier family 13 member 4. (608 aa)
	APZ42_026305	I'M NOT DEAD yet protein. (240 aa)
	APZ42_023431	Putative Potassium voltage-gated channel protein eag. (133 aa)
	APZ42_017896	YrdC domain-containing protein. (226 aa)
	APZ42_005449	Response regulatory domain-containing protein. (159 aa)
	APZ42_011469	Putative Potassium voltage-gated channel protein eag. (956 aa)
	APZ42_012032	Putative Transcription elongation factor SPT6. (2295 aa)
	APZ42_012390	Solute carrier family 13 member 4. (609 aa)
	APZ42_012395	Solute carrier family 13 member 4. (663 aa)
	APZ42_012562	Uncharacterized protein. (287 aa)
	APZ42_014493	Cysteine N-palmitoyltransferase HHAT-like protein; Belongs to the membrane-bound acyltransferase family. (398 aa)
	APZ42_015120	I'M NOT DEAD yet protein. (542 aa)
	APZ42_002108	KdpD domain-containing protein. (123 aa)
	APZ42_002347	Uncharacterized protein. (156 aa)
	APZ42_005899	Uncharacterized protein. (150 aa)
	APZ42_003364	DUF4143 domain-containing protein. (159 aa)
	APZ42_020261	tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (505 aa)
	APZ42_021558	Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (624 aa)
	APZ42_016402	Protein-serine/threonine kinase. (412 aa)
	APZ42_020499	Protein-serine/threonine kinase. (419 aa)
	APZ42_026242	I'M NOT DEAD yet protein. (576 aa)
	APZ42_003177	Histidine kinase domain-containing protein. (155 aa)
	APZ42_002741	Histidine kinase domain-containing protein. (166 aa)
	APZ42_002716	Bac_DnaA domain-containing protein. (124 aa)
	APZ42_002490	I'M NOT DEAD yet protein. (94 aa)
	APZ42_002246	Bac_DnaA_C domain-containing protein. (151 aa)
	APZ42_002196	Sigma54_CBD domain-containing protein. (177 aa)
	APZ42_004012	Putative Cytochrome D ubiquinol oxidase subunit. (133 aa)
	APZ42_002109	Aerobic respiration control sensor ArcB-like protein. (163 aa)
	APZ42_002028	Uncharacterized protein. (220 aa)
	APZ42_001719	I'M NOT DEAD yet protein. (74 aa)
	APZ42_031246	Protein I'm not dead yet 2. (523 aa)
	APZ42_028685	S1 RNA-binding domain-containing protein 1. (809 aa)
	APZ42_027855	Amino acid transporter. (527 aa)
	APZ42_004558	I'M NOT DEAD yet protein. (109 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001719	APZ42_027855	A0A164ISP7	A0A164R0M1	I'M NOT DEAD yet protein.	Amino acid transporter.	0.602
APZ42_002028	APZ42_002347	A0A164IKB1	A0A162CYW5	Uncharacterized protein.	Uncharacterized protein.	0.537
APZ42_002028	APZ42_005899	A0A164IKB1	A0A162CSJ8	Uncharacterized protein.	Uncharacterized protein.	0.535
APZ42_002108	APZ42_002196	A0A162CZB7	A0A164IFY4	KdpD domain-containing protein.	Sigma54_CBD domain-containing protein.	0.632
APZ42_002109	APZ42_002196	A0A164II26	A0A164IFY4	Aerobic respiration control sensor ArcB-like protein.	Sigma54_CBD domain-containing protein.	0.632
APZ42_002109	APZ42_003177	A0A164II26	A0A164HRL8	Aerobic respiration control sensor ArcB-like protein.	Histidine kinase domain-containing protein.	0.423
APZ42_002196	APZ42_002108	A0A164IFY4	A0A162CZB7	Sigma54_CBD domain-containing protein.	KdpD domain-containing protein.	0.632
APZ42_002196	APZ42_002109	A0A164IFY4	A0A164II26	Sigma54_CBD domain-containing protein.	Aerobic respiration control sensor ArcB-like protein.	0.632
APZ42_002196	APZ42_002246	A0A164IFY4	A0A164IEI7	Sigma54_CBD domain-containing protein.	Bac_DnaA_C domain-containing protein.	0.487
APZ42_002196	APZ42_002716	A0A164IFY4	A0A164I371	Sigma54_CBD domain-containing protein.	Bac_DnaA domain-containing protein.	0.487
APZ42_002196	APZ42_002741	A0A164IFY4	A0A164I2J7	Sigma54_CBD domain-containing protein.	Histidine kinase domain-containing protein.	0.632
APZ42_002196	APZ42_003177	A0A164IFY4	A0A164HRL8	Sigma54_CBD domain-containing protein.	Histidine kinase domain-containing protein.	0.632
APZ42_002196	APZ42_005449	A0A164IFY4	A0A164GFU7	Sigma54_CBD domain-containing protein.	Response regulatory domain-containing protein.	0.632
APZ42_002196	APZ42_016402	A0A164IFY4	A0A0P5HJF0	Sigma54_CBD domain-containing protein.	Protein-serine/threonine kinase.	0.632
APZ42_002196	APZ42_020499	A0A164IFY4	A0A0P5FS44	Sigma54_CBD domain-containing protein.	Protein-serine/threonine kinase.	0.632
APZ42_002196	APZ42_027855	A0A164IFY4	A0A164R0M1	Sigma54_CBD domain-containing protein.	Amino acid transporter.	0.571
APZ42_002246	APZ42_002196	A0A164IEI7	A0A164IFY4	Bac_DnaA_C domain-containing protein.	Sigma54_CBD domain-containing protein.	0.487
APZ42_002246	APZ42_020261	A0A164IEI7	A0A0P5WKK0	Bac_DnaA_C domain-containing protein.	tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.522
APZ42_002347	APZ42_002028	A0A162CYW5	A0A164IKB1	Uncharacterized protein.	Uncharacterized protein.	0.537
APZ42_002347	APZ42_005899	A0A162CYW5	A0A162CSJ8	Uncharacterized protein.	Uncharacterized protein.	0.525