STRINGSTRING
APZ42_013719 APZ42_013719 APZ42_020734 APZ42_020734 APZ42_020165 APZ42_020165 APZ42_028636 APZ42_028636 APZ42_032645 APZ42_032645 APZ42_030617 APZ42_030617 APZ42_025064 APZ42_025064 PAN3 PAN3 APZ42_023764 APZ42_023764 APZ42_023314 APZ42_023314 EOG090X09DD EOG090X09DD APZ42_022858 APZ42_022858 EOG090X07B6 EOG090X07B6 EOG090X0KYU EOG090X0KYU APZ42_014169 APZ42_014169 APZ42_027194 APZ42_027194 APZ42_012906 APZ42_012906 APZ42_016064 APZ42_016064 EOG090X033I EOG090X033I APZ42_026704 APZ42_026704 APZ42_034295 APZ42_034295 APZ42_012385 APZ42_012385 APZ42_023758 APZ42_023758 APZ42_030625 APZ42_030625 APZ42_013675 APZ42_013675 APZ42_022864 APZ42_022864 APZ42_014605 APZ42_014605 APZ42_023168 APZ42_023168 APZ42_017735 APZ42_017735 LSM4 LSM4 APZ42_013175 APZ42_013175 APZ42_019565 APZ42_019565 APZ42_022281 APZ42_022281 APZ42_028638 APZ42_028638 APZ42_030268 APZ42_030268 APZ42_001903 APZ42_001903 APZ42_022457 APZ42_022457 APZ42_020721 APZ42_020721 APZ42_019388 APZ42_019388 APZ42_029010 APZ42_029010 APZ42_024544 APZ42_024544 APZ42_025786 APZ42_025786 APZ42_005070 APZ42_005070 APZ42_015997 APZ42_015997 APZ42_016013 APZ42_016013 APZ42_015998 APZ42_015998 EOG090X0CWA EOG090X0CWA APZ42_015168 APZ42_015168 APZ42_013906 APZ42_013906 APZ42_013794 APZ42_013794 LSM3 LSM3 APZ42_013361 APZ42_013361 APZ42_012835 APZ42_012835 APZ42_012115 APZ42_012115 APZ42_011412 APZ42_011412 APZ42_011546 APZ42_011546 LSM1 LSM1 APZ42_011031 APZ42_011031 APZ42_005050 APZ42_005050 APZ42_005047 APZ42_005047 APZ42_003890 APZ42_003890 APZ42_002135 APZ42_002135 APZ42_001366 APZ42_001366 APZ42_000421 APZ42_000421 APZ42_034476 APZ42_034476 APZ42_034257 APZ42_034257 APZ42_034172 APZ42_034172 APZ42_033767 APZ42_033767 EOG090X09A7 EOG090X09A7 APZ42_032566 APZ42_032566 APZ42_031389 APZ42_031389 APZ42_029902 APZ42_029902 APZ42_029746 APZ42_029746 APZ42_029500 APZ42_029500 APZ42_028092 APZ42_028092 APZ42_027677 APZ42_027677 APZ42_027208 APZ42_027208 APZ42_027248 APZ42_027248 APZ42_027310 APZ42_027310 APZ42_026680 APZ42_026680 APZ42_026440 APZ42_026440 APZ42_026487 APZ42_026487 LSM5 LSM5 APZ42_025991 APZ42_025991 APZ42_025680 APZ42_025680 APZ42_025546 APZ42_025546 APZ42_024658 APZ42_024658 APZ42_024502 APZ42_024502 APZ42_024056 APZ42_024056 APZ42_023688 APZ42_023688 APZ42_023254 APZ42_023254 APZ42_022994 APZ42_022994 EOG090X03U0 EOG090X03U0 APZ42_022161 APZ42_022161 APZ42_021901 APZ42_021901 APZ42_020416 APZ42_020416 APZ42_019392 APZ42_019392 APZ42_018704 APZ42_018704 APZ42_018443 APZ42_018443 APZ42_018388 APZ42_018388 APZ42_017849 APZ42_017849 APZ42_017820 APZ42_017820 APZ42_017491 APZ42_017491 APZ42_016904 APZ42_016904 APZ42_016915 APZ42_016915
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_013719Uncharacterized protein. (44 aa)
APZ42_020734T-complex protein 1 subunit epsilon. (540 aa)
APZ42_0201652-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (457 aa)
APZ42_028636Putative ATP-dependent RNA helicase YTHDC2. (991 aa)
APZ42_032645Exosome complex component RRP43. (389 aa)
APZ42_030617CCR4-NOT transcription complex subunit. (1010 aa)
APZ42_025064CCR4-NOT transcription complex subunit. (2481 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (674 aa)
APZ42_023764Exosome complex component CSL4. (212 aa)
APZ42_023314Exosome complex exonuclease RRP41. (246 aa)
EOG090X09DDExosome complex component RRP4. (292 aa)
APZ42_022858Peptidyl-alpha-hydroxyglycine alpha-amidating lyase. (447 aa)
EOG090X07B6mRNA-decapping enzyme 1B. (405 aa)
EOG090X0KYUU6 snRNA-associated Sm LSm7-like protein. (115 aa)
APZ42_014169WD repeat-containing protein WRAP73. (420 aa)
APZ42_027194Exosome component 10. (822 aa)
APZ42_012906ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (450 aa)
APZ42_016064Exosome complex exonuclease MTR3. (288 aa)
EOG090X033IT-complex protein 1 subunit alpha. (555 aa)
APZ42_026704Peptidyl-alpha-hydroxyglycine alpha-amidating lyase. (464 aa)
APZ42_03429560 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (576 aa)
APZ42_012385Nucleoside diphosphate-linked moiety X motif 18; Belongs to the Nudix hydrolase family. (342 aa)
APZ42_023758CCR4-NOT transcription complex subunit. (459 aa)
APZ42_030625COBW domain-containing protein 3. (387 aa)
APZ42_013675Putative UPF0692 protein. (279 aa)
APZ42_022864Putative Serine/threonine-protein phosphatase 4 regulatory subunit. (456 aa)
APZ42_0146052',5'-phosphodiesterase 12. (596 aa)
APZ42_023168Putative Non-canonical poly(A) RNA polymerase PAPD5. (462 aa)
APZ42_017735Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (769 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
APZ42_013175Enhancer of mRNA-decapping protein 4. (1123 aa)
APZ42_019565T-complex protein 1 subunit zeta. (530 aa)
APZ42_022281Transmembrane protein 87A. (540 aa)
APZ42_028638U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
APZ42_030268Exosome complex component RRP43. (276 aa)
APZ42_001903Protein BTG4. (207 aa)
APZ42_022457Ufm1-specific protease 2. (571 aa)
APZ42_0207212-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (416 aa)
APZ42_019388ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (797 aa)
APZ42_029010Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2. (822 aa)
APZ42_024544Putative CCR4-NOT transcription complex subunit. (733 aa)
APZ42_025786CCHC-type zinc finger protein. (288 aa)
APZ42_005070T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family. (136 aa)
APZ42_015997Nudix hydrolase 8; Belongs to the Nudix hydrolase family. (262 aa)
APZ42_016013Uncharacterized protein. (559 aa)
APZ42_015998Uncharacterized protein. (391 aa)
EOG090X0CWAExosome complex component RRP42. (290 aa)
APZ42_015168Exosome complex exonuclease rrp46. (218 aa)
APZ42_013906PAB-dependent poly(A)-specific ribonuclease subunit PAN2. (1060 aa)
APZ42_0137945'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1015 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
APZ42_013361Peptidyl-alpha-hydroxyglycine-alpha-amidating lyase. (429 aa)
APZ42_012835T-complex protein 1 subunit beta. (534 aa)
APZ42_012115DIS3 exonuclease 2-like protein. (154 aa)
APZ42_011412T-complex protein 1 subunit gamma. (547 aa)
APZ42_011546Putative ATP-dependent RNA helicase DHX30. (1182 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (137 aa)
APZ42_011031D-Importin 7/RanBP7. (1041 aa)
APZ42_005050Putative ATP-dependent RNA Helicase me31b. (158 aa)
APZ42_005047ATP-dependent RNA Helicase me31b. (121 aa)
APZ42_003890ATP-dependent RNA Helicase me31b. (92 aa)
APZ42_002135HEAT shock 70 kDa protein cognate 5. (129 aa)
APZ42_001366Superkiller viralicidic activity 2 2. (293 aa)
APZ42_000421Putative ATP-dependent RNA Helicase me31b. (74 aa)
APZ42_034476Putative Dis3; Belongs to the RNR ribonuclease family. (1310 aa)
APZ42_034257CCHC-type domain-containing protein. (363 aa)
APZ42_034172Putative Poly-specific ribonuclease PARN. (577 aa)
APZ42_033767Putative Ankyrin repeat and SOCS box protein 3. (1585 aa)
EOG090X09A7Cell differentiation protein RCD1. (299 aa)
APZ42_032566Putative Cuticular protein 30F. (851 aa)
APZ42_031389Peptidylglycine alpha-hydroxylating monooxygenase. (351 aa)
APZ42_029902WD repeat-containing protein 61. (369 aa)
APZ42_029746Putative Ufm1-specific protease 1. (219 aa)
APZ42_029500Superkiller viralicidic activity 2 2. (703 aa)
APZ42_028092Putative Endoplasmic reticulum membrane-associated RNA degradation protein. (659 aa)
APZ42_027677Peptidase A2 domain-containing protein. (1144 aa)
APZ42_027208Nuclear nucleic acid-binding protein C1D. (169 aa)
APZ42_027248Helicase SKI2W. (1240 aa)
APZ42_027310Glucose-repressible alcohol dehydrogenase. (365 aa)
APZ42_026680ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (303 aa)
APZ42_026440Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (276 aa)
APZ42_026487Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (621 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
APZ42_025991PAT1 1 protein. (724 aa)
APZ42_025680Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family. (958 aa)
APZ42_025546TE: Reverse transcriptase. (802 aa)
APZ42_024658mRNA-decapping enzyme 2. (365 aa)
APZ42_024502Exonuclease 3'-5' domain-containing protein 2; Belongs to the nanos family. (773 aa)
APZ42_0240565'-3' exoribonuclease 1. (1639 aa)
APZ42_023688Putative Target of EGR1 protein 1. (421 aa)
APZ42_023254YjeF N-terminal domain-containing protein. (156 aa)
APZ42_022994Exosome complex component RRP40. (242 aa)
EOG090X03U0T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (540 aa)
APZ42_022161Anti_prolifrtn domain-containing protein. (261 aa)
APZ42_021901CCR4-NOT transcription complex subunit 6. (461 aa)
APZ42_020416CCR4-NOT transcription complex subunit 10. (688 aa)
APZ42_019392Plexin domain-containing protein 1. (556 aa)
APZ42_018704Putative Zinc finger CCHC domain-containing protein. (746 aa)
APZ42_018443T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family. (299 aa)
APZ42_018388Alpha-enolase. (427 aa)
APZ42_017849HEAT shock 70 kDa protein cognate 5; Belongs to the heat shock protein 70 family. (613 aa)
APZ42_017820U6 snRNA-associated Sm protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
APZ42_017491HRDC domain-containing protein. (512 aa)
APZ42_016904Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (209 aa)
APZ42_016915Tetratricopeptide repeat protein 37. (1337 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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