STRINGSTRING
APZ42_001454 APZ42_001454 APZ42_003546 APZ42_003546 APZ42_022568 APZ42_022568 APZ42_004333 APZ42_004333 APZ42_028882 APZ42_028882 APZ42_027089 APZ42_027089 APZ42_016097 APZ42_016097 APZ42_015154 APZ42_015154 APZ42_014126 APZ42_014126 APZ42_013450 APZ42_013450 EOG090X0G3U EOG090X0G3U APZ42_010927 APZ42_010927 APZ42_010561 APZ42_010561 APZ42_010420 APZ42_010420 APZ42_009018 APZ42_009018 APZ42_008910 APZ42_008910 APZ42_008447 APZ42_008447 APZ42_006686 APZ42_006686 APZ42_005827 APZ42_005827 APZ42_003923 APZ42_003923 APZ42_002389 APZ42_002389 APZ42_001217 APZ42_001217 APZ42_000083 APZ42_000083 APZ42_034567 APZ42_034567 APZ42_034201 APZ42_034201 APZ42_033198 APZ42_033198 APZ42_033162 APZ42_033162 APZ42_033019 APZ42_033019 APZ42_032246 APZ42_032246 APZ42_031273 APZ42_031273 APZ42_031186 APZ42_031186 APZ42_030620 APZ42_030620 APZ42_030264 APZ42_030264 APZ42_024457 APZ42_024457 APZ42_024123 APZ42_024123 APZ42_021543 APZ42_021543 APZ42_021143 APZ42_021143 APZ42_020057 APZ42_020057 APZ42_020063 APZ42_020063 APZ42_019138 APZ42_019138 APZ42_018111 APZ42_018111 APZ42_016194 APZ42_016194 APZ42_018703 APZ42_018703 APZ42_018134 APZ42_018134 APZ42_014346 APZ42_014346 APZ42_020348 APZ42_020348 APZ42_011418 APZ42_011418 APZ42_012437 APZ42_012437 APZ42_012363 APZ42_012363 EOG090X0O5J EOG090X0O5J APZ42_032613 APZ42_032613 APZ42_033980 APZ42_033980 APZ42_033200 APZ42_033200 APZ42_022929 APZ42_022929 APZ42_028709 APZ42_028709 APZ42_026784 APZ42_026784
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_001454Putative Oligonucleotide/oligosaccharide-binding fold-containing protein 1/sw. (194 aa)
APZ42_003546Uncharacterized protein. (117 aa)
APZ42_022568Pms2. (810 aa)
APZ42_004333Replication factor C subunit 3. (331 aa)
APZ42_028882DNA ligase. (816 aa)
APZ42_027089DDE_Tnp_IS1595 domain-containing protein. (674 aa)
APZ42_016097DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1329 aa)
APZ42_015154Putative MLH1, MutL protein 1. (712 aa)
APZ42_014126Putative Mismatch repair ATPase Msh4. (1064 aa)
APZ42_013450DDE_Tnp_IS1595 domain-containing protein. (134 aa)
EOG090X0G3UCoiled-coil domain-containing protein 94. (324 aa)
APZ42_010927Replication factor C subunit 2. (288 aa)
APZ42_010561DDE_Tnp_IS1595 domain-containing protein. (148 aa)
APZ42_010420Uncharacterized protein. (53 aa)
APZ42_009018Uncharacterized protein. (136 aa)
APZ42_008910Uncharacterized protein. (81 aa)
APZ42_008447Uncharacterized protein. (76 aa)
APZ42_006686Uncharacterized protein. (173 aa)
APZ42_005827DDE_Tnp_IS1595 domain-containing protein. (106 aa)
APZ42_003923Uncharacterized protein. (93 aa)
APZ42_002389Uncharacterized protein. (147 aa)
APZ42_001217Exonuclease domain-containing protein. (151 aa)
APZ42_000083Replication factor C subunit 4. (98 aa)
APZ42_034567DDE_Tnp_IS1595 domain-containing protein. (218 aa)
APZ42_034201Putative Cell cycle checkpoint protein RAD17. (298 aa)
APZ42_033198DNA polymerase delta small subunit. (444 aa)
APZ42_033162ResIII domain-containing protein. (262 aa)
APZ42_033019Putative MLH3, MutL protein 3. (763 aa)
APZ42_032246DDE_Tnp_IS1595 domain-containing protein. (143 aa)
APZ42_031273Replication factor C subunit 2. (344 aa)
APZ42_031186CCHC-type domain-containing protein. (505 aa)
APZ42_030620Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
APZ42_030264Putative MSH3, mismatch repair ATPase; Component of the post-replicative DNA mismatch repair system (MMR). (1016 aa)
APZ42_024457Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
APZ42_024123Uncharacterized protein. (99 aa)
APZ42_021543Putative MLH2, MutL protein 2. (846 aa)
APZ42_021143DNA polymerase delta subunit 3. (448 aa)
APZ42_020057Mismatch repair ATPase Msh2. (475 aa)
APZ42_020063Mismatch repair ATPase Msh2. (200 aa)
APZ42_019138ATPase_AAA_core domain-containing protein. (897 aa)
APZ42_018111Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
APZ42_016194Uncharacterized protein. (128 aa)
APZ42_018703F-box DNA helicase 1. (949 aa)
APZ42_018134Putative MSH5, mismatch repair ATPase. (917 aa)
APZ42_014346Spindle assembly abnormal protein 6. (571 aa)
APZ42_020348Putative Exonuclease 1. (664 aa)
APZ42_011418Replication protein A 32 kDa subunit. (268 aa)
APZ42_012437Replication factor C subunit 3. (328 aa)
APZ42_012363PRKR-interacting protein 1 protein. (180 aa)
EOG090X0O5JSingle-stranded DNA-binding protein, mitochondrial. (166 aa)
APZ42_032613Replication protein A 14 kDa subunit. (111 aa)
APZ42_033980Replication factor C subunit 1. (1083 aa)
APZ42_033200Putative RNA exonuclease 4. (341 aa)
APZ42_022929DNA polymerase. (1088 aa)
APZ42_028709Meiosis-specific with OB domain-containing protein. (462 aa)
APZ42_026784Three prime repair exonuclease. (243 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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