STRINGSTRING
APZ42_017869 APZ42_017869 APZ42_016501 APZ42_016501 APZ42_019569 APZ42_019569 APZ42_021393 APZ42_021393 APZ42_023029 APZ42_023029 EOG090X0AQP EOG090X0AQP APZ42_027306 APZ42_027306 APZ42_028099 APZ42_028099 APZ42_028258 APZ42_028258 EOG090X0MTI EOG090X0MTI APZ42_030409 APZ42_030409 APZ42_030819 APZ42_030819 APZ42_033028 APZ42_033028 APZ42_010997 APZ42_010997 APZ42_011596 APZ42_011596 EOG090X0HBC EOG090X0HBC APZ42_012929 APZ42_012929 APZ42_013321 APZ42_013321 APZ42_013677 APZ42_013677 APZ42_026018 APZ42_026018 EOG090X05E6 EOG090X05E6 APZ42_024700 APZ42_024700 APZ42_020758 APZ42_020758 APZ42_018667 APZ42_018667 APZ42_013694 APZ42_013694 EOG090X0E0D EOG090X0E0D APZ42_014537 APZ42_014537 APZ42_030962 APZ42_030962 APZ42_019868 APZ42_019868 APZ42_015820 APZ42_015820 APZ42_016928 APZ42_016928 APZ42_014065 APZ42_014065 APZ42_019647 APZ42_019647 APZ42_029114 APZ42_029114 APZ42_026739 APZ42_026739 APZ42_019824 APZ42_019824 EOG090X0GIP EOG090X0GIP APZ42_015885 APZ42_015885
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_017869Putative Aminopeptidase NPEPL1. (529 aa)
APZ42_016501Synaptobrevin YKT6; Belongs to the synaptobrevin family. (201 aa)
APZ42_019569Serine/threonine-protein kinase MRCK beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2003 aa)
APZ42_021393Putative Calmodulin-binding transcription activator 1. (1335 aa)
APZ42_023029Synaptosomal-associated protein; Belongs to the SNAP-25 family. (144 aa)
EOG090X0AQPEOG090X0AQP; Belongs to the syntaxin family. (308 aa)
APZ42_027306Syntaxin-8. (240 aa)
APZ42_028099Putative Vesicle-associated membrane protein 8. (118 aa)
APZ42_028258Vesicle transport protein SEC20. (208 aa)
EOG090X0MTISynaptosomal-associated protein 29. (283 aa)
APZ42_030409Metal-response element-binding transcription factor. (647 aa)
APZ42_030819Histone chaperone ASF1A. (193 aa)
APZ42_033028mTERF domain-containing protein. (360 aa)
APZ42_010997Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1. (475 aa)
APZ42_011596Syntaxin-17. (298 aa)
EOG090X0HBCEOG090X0HBC; Belongs to the synaptobrevin family. (213 aa)
APZ42_012929Vesicle-associated membrane protein 8. (122 aa)
APZ42_013321Putative Syntaxin; Belongs to the syntaxin family. (294 aa)
APZ42_013677Histone chaperone asf1. (187 aa)
APZ42_026018Vesicle-associated membrane protein 7. (133 aa)
EOG090X05E6Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (593 aa)
APZ42_024700Vesicle-associated membrane protein 3. (94 aa)
APZ42_020758Syntaxin-1A. (305 aa)
APZ42_018667Syntaxin-5; Belongs to the syntaxin family. (423 aa)
APZ42_013694t-SNARE domain-containing protein; Belongs to the syntaxin family. (278 aa)
EOG090X0E0DMediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (246 aa)
APZ42_014537Vesicle-associated membrane protein 4. (135 aa)
APZ42_030962Cyclin-related protein FAM58A; Belongs to the cyclin family. (266 aa)
APZ42_019868Syntaxin-12; Belongs to the syntaxin family. (270 aa)
APZ42_015820Syntaxin-18. (316 aa)
APZ42_016928Vesicle transport through interaction with t-SNAREsB. (227 aa)
APZ42_014065Syntaxin-6; Belongs to the syntaxin family. (258 aa)
APZ42_019647Syntaxin-1A; Belongs to the syntaxin family. (294 aa)
APZ42_029114Vesicle transport through interaction with t-SNAREsA. (218 aa)
APZ42_026739Vesicle transport protein USE1. (273 aa)
APZ42_019824Integrator complex subunit. (332 aa)
EOG090X0GIPGolgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (213 aa)
APZ42_015885Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (238 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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