(11 nodes) Pathogenic Escherichia coli infection network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_015378	Transmembrane emp24 domain-containing protein bai. (205 aa)
	APZ42_007247	Uncharacterized protein. (207 aa)
	APZ42_033255	Unconventional myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1845 aa)
	APZ42_019397	Unconventional myosin-Ih; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1017 aa)
	APZ42_023540	Uncharacterized protein. (452 aa)
	APZ42_020764	Myosin-IB. (305 aa)
	APZ42_020752	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (634 aa)
	APZ42_023267	Uncharacterized protein. (631 aa)
	APZ42_032180	Uncharacterized protein. (257 aa)
	APZ42_004911	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (202 aa)
	APZ42_015375	BAX inhibitor 1; Belongs to the BI1 family. (244 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_004911	APZ42_020752	A0A162EZN0	A0A164XDM3	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.942
APZ42_004911	APZ42_020764	A0A162EZN0	A0A164XDN5	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin-IB.	0.903
APZ42_020752	APZ42_004911	A0A164XDM3	A0A162EZN0	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.942
APZ42_020752	APZ42_020764	A0A164XDM3	A0A164XDN5	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin-IB.	0.899
APZ42_020764	APZ42_004911	A0A164XDN5	A0A162EZN0	Myosin-IB.	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.903
APZ42_020764	APZ42_020752	A0A164XDN5	A0A164XDM3	Myosin-IB.	Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.899