15 items (Stomoxys calcitrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1I8NS22	TPR_REGION domain-containing protein. (326 aa)
	A0A1I8P005	Uncharacterized protein. (304 aa)
	A0A1I8P3Q7	Uncharacterized protein. (1540 aa)
	A0A1I8P553	Uncharacterized protein. (596 aa)
	A0A1I8P6Y8	Uncharacterized protein. (537 aa)
	A0A1I8PEK8	DBB domain-containing protein. (1190 aa)
	A0A1I8PEN9	Uncharacterized protein. (418 aa)
	A0A1I8PWL2	Uncharacterized protein. (855 aa)
	A0A1I8Q0P9	Uncharacterized protein. (981 aa)
	A0A1I8Q185	IRS-type PTB domain-containing protein. (460 aa)
	A0A1I8Q7Z5	Uncharacterized protein. (1976 aa)
	A0A1I8Q872	Uncharacterized protein. (928 aa)
	A0A1I8QB42	Uncharacterized protein. (461 aa)
	A0A1I8QD28	Fibrinogen C-terminal domain-containing protein. (745 aa)
	A0A1I8QDM7	SH2 domain-containing protein. (380 aa)

Your Current Organism:

Stomoxys calcitrans

NCBI taxonomy Id: 35570
Other names: S. calcitrans, Stomoxis calcitrans, biting house fly, stable fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8P005	A0A1I8P553	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1I8P005	A0A1I8P6Y8	Uncharacterized protein.	Uncharacterized protein.	0.515
A0A1I8P005	A0A1I8Q0P9	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1I8P005	A0A1I8Q185	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.929
A0A1I8P005	A0A1I8Q872	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A1I8P005	A0A1I8QB42	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A1I8P553	A0A1I8P005	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1I8P553	A0A1I8P6Y8	Uncharacterized protein.	Uncharacterized protein.	0.533
A0A1I8P553	A0A1I8PEK8	Uncharacterized protein.	DBB domain-containing protein.	0.491
A0A1I8P553	A0A1I8Q0P9	Uncharacterized protein.	Uncharacterized protein.	0.780
A0A1I8P553	A0A1I8Q872	Uncharacterized protein.	Uncharacterized protein.	0.710
A0A1I8P553	A0A1I8QB42	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A1I8P6Y8	A0A1I8P005	Uncharacterized protein.	Uncharacterized protein.	0.515
A0A1I8P6Y8	A0A1I8P553	Uncharacterized protein.	Uncharacterized protein.	0.533
A0A1I8P6Y8	A0A1I8PEK8	Uncharacterized protein.	DBB domain-containing protein.	0.428
A0A1I8P6Y8	A0A1I8Q0P9	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A1I8P6Y8	A0A1I8Q872	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A1I8P6Y8	A0A1I8QB42	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A1I8PEK8	A0A1I8P553	DBB domain-containing protein.	Uncharacterized protein.	0.491
A0A1I8PEK8	A0A1I8P6Y8	DBB domain-containing protein.	Uncharacterized protein.	0.428