6 items (Stomoxys calcitrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1I8PMT3	Uncharacterized protein. (1627 aa)
	A0A1I8PYA8	Uncharacterized protein. (190 aa)
	A0A1I8QAB4	Receptor protein-tyrosine kinase. (1435 aa)
	A0A1I8NTH8	Uncharacterized protein. (201 aa)
	A0A1I8NY34	Uncharacterized protein. (1068 aa)
	A0A1I8PIL0	Uncharacterized protein. (211 aa)

Your Current Organism:

Stomoxys calcitrans

NCBI taxonomy Id: 35570
Other names: S. calcitrans, Stomoxis calcitrans, biting house fly, stable fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8NTH8	A0A1I8PIL0	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A1I8NTH8	A0A1I8PMT3	Uncharacterized protein.	Uncharacterized protein.	0.919
A0A1I8NTH8	A0A1I8QAB4	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.922
A0A1I8NY34	A0A1I8PIL0	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A1I8NY34	A0A1I8PMT3	Uncharacterized protein.	Uncharacterized protein.	0.881
A0A1I8NY34	A0A1I8QAB4	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.885
A0A1I8PIL0	A0A1I8NTH8	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A1I8PIL0	A0A1I8NY34	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A1I8PIL0	A0A1I8PMT3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1I8PIL0	A0A1I8PYA8	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A1I8PIL0	A0A1I8QAB4	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.994
A0A1I8PMT3	A0A1I8NTH8	Uncharacterized protein.	Uncharacterized protein.	0.919
A0A1I8PMT3	A0A1I8NY34	Uncharacterized protein.	Uncharacterized protein.	0.881
A0A1I8PMT3	A0A1I8PIL0	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1I8PMT3	A0A1I8PYA8	Uncharacterized protein.	Uncharacterized protein.	0.938
A0A1I8PMT3	A0A1I8QAB4	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.988
A0A1I8PYA8	A0A1I8PIL0	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A1I8PYA8	A0A1I8PMT3	Uncharacterized protein.	Uncharacterized protein.	0.938
A0A1I8PYA8	A0A1I8QAB4	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.940
A0A1I8QAB4	A0A1I8NTH8	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.922