10 items (Stomoxys calcitrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1I8PU39	Uncharacterized protein. (376 aa)
	A0A1I8PZ44	Uncharacterized protein. (376 aa)
	A0A1I8Q4Q4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (909 aa)
	A0A1I8Q4R8	Uncharacterized protein. (376 aa)
	A0A1I8Q8X9	Uncharacterized protein. (376 aa)
	A0A1I8QDM8	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1680 aa)
	A0A1I8NVB0	PID domain-containing protein. (2542 aa)
	A0A1I8P079	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (227 aa)
	A0A1I8PKN3	Uncharacterized protein. (376 aa)
	A0A1I8PP22	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (437 aa)

Your Current Organism:

Stomoxys calcitrans

NCBI taxonomy Id: 35570
Other names: S. calcitrans, Stomoxis calcitrans, biting house fly, stable fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1I8NVB0	A0A1I8P079	PID domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.783
A0A1I8NVB0	A0A1I8PP22	PID domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.715
A0A1I8NVB0	A0A1I8Q4Q4	PID domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.632
A0A1I8NVB0	A0A1I8QDM8	PID domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.804
A0A1I8P079	A0A1I8NVB0	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	PID domain-containing protein.	0.783
A0A1I8P079	A0A1I8PP22	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.956
A0A1I8P079	A0A1I8Q4Q4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.787
A0A1I8P079	A0A1I8QDM8	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
A0A1I8PKN3	A0A1I8Q4Q4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.484
A0A1I8PKN3	A0A1I8Q4R8	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A1I8PKN3	A0A1I8Q8X9	Uncharacterized protein.	Uncharacterized protein.	0.749
A0A1I8PKN3	A0A1I8QDM8	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.510
A0A1I8PP22	A0A1I8NVB0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	PID domain-containing protein.	0.715
A0A1I8PP22	A0A1I8P079	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.956
A0A1I8PP22	A0A1I8Q4Q4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.793
A0A1I8PP22	A0A1I8QDM8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.959
A0A1I8PU39	A0A1I8Q4Q4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.484
A0A1I8PU39	A0A1I8QDM8	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.510
A0A1I8PZ44	A0A1I8Q4Q4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.484
A0A1I8PZ44	A0A1I8QDM8	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.510