STRINGSTRING
Cphy_1277 Cphy_1277 Cphy_1278 Cphy_1278 Cphy_1279 Cphy_1279 Cphy_1280 Cphy_1280 Cphy_1281 Cphy_1281 Cphy_2233 Cphy_2233 Cphy_2234 Cphy_2234 Cphy_2235 Cphy_2235 Cphy_2238 Cphy_2238 Cphy_2319 Cphy_2319 Cphy_2320 Cphy_2320 Cphy_2321 Cphy_2321
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cphy_1277KEGG: cbe:Cbei_2068 glutaredoxin-like protein. (88 aa)
Cphy_1278Hypothetical protein; KEGG: pth:PTH_2361 predicted secreted protein. (227 aa)
Cphy_1279Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: drm:Dred_1515 regulatory protein GntR, HTH. (125 aa)
Cphy_1280PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbf:CLI_0638 ABC transporter, ATP-binding protein. (228 aa)
Cphy_1281KEGG: cno:NT01CX_0786 hypothetical protein. (247 aa)
Cphy_2233Hypothetical protein. (216 aa)
Cphy_2234PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ckl:CKL_2362 predicted ABC transporter, ATPase component. (231 aa)
Cphy_2235PFAM: regulatory protein GntR HTH; KEGG: cac:CAC0265 transcriptional regulator, GntR family. (117 aa)
Cphy_2238Hypothetical protein. (81 aa)
Cphy_2319Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: drm:Dred_3243 regulatory protein GntR, HTH. (120 aa)
Cphy_2320PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lbu:LBUL_1588 ABC-type multidrug transport system, ATPase component. (299 aa)
Cphy_2321KEGG: amt:Amet_1325 hypothetical protein. (694 aa)
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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