STRINGSTRING
AOB35127.1 AOB35127.1 AOB35129.1 AOB35129.1 AOB35130.1 AOB35130.1 AOB35131.1 AOB35131.1 AOB35132.1 AOB35132.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOB35127.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
AOB35129.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
AOB35130.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
AOB35131.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (111 aa)
AOB35132.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (59 aa)
Your Current Organism:
Bordetella holmesii
NCBI taxonomy Id: 35814
Other names: ATCC 51541, B. holmesii, CCUG 34073, CDC F5101, CDC nonoxidizer group 2 (NO-2), CIP 104394, DSM 13416, LMG 15945, LMG:15945, NCTC 12912
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