STRINGSTRING
AOB37300.1 AOB37300.1 AOB35574.1 AOB35574.1 AOB35897.1 AOB35897.1 AOB36062.1 AOB36062.1 fahA fahA ligK ligK AOB36801.1 AOB36801.1 catA catA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOB37300.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AOB35574.1Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
AOB35897.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AOB36062.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
fahAFumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
ligK4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AOB36801.12-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
catACatechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
Your Current Organism:
Bordetella holmesii
NCBI taxonomy Id: 35814
Other names: ATCC 51541, B. holmesii, CCUG 34073, CDC F5101, CDC nonoxidizer group 2 (NO-2), CIP 104394, DSM 13416, LMG 15945, LMG:15945, NCTC 12912
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