STRINGSTRING
AOB35566.1 AOB35566.1 AOB35464.1 AOB35464.1 AOB37300.1 AOB37300.1 AOB35392.1 AOB35392.1 AOB35176.1 AOB35176.1 AOB35174.1 AOB35174.1 AOB35172.1 AOB35172.1 paaD paaD AOB34114.1 AOB34114.1 AOB34250.1 AOB34250.1 AOB37240.1 AOB37240.1 AOB34341.1 AOB34341.1 AOB34475.1 AOB34475.1 boxC boxC boxB boxB anmK anmK AOB34798.1 AOB34798.1 AOB34916.1 AOB34916.1 paaX paaX paaG paaG paaH paaH paaI paaI paaJ paaJ AOB37084.1 AOB37084.1 AOB37043.1 AOB37043.1 AOB36801.1 AOB36801.1 AOB36799.1 AOB36799.1 ligK ligK thpD thpD AOB36594.1 AOB36594.1 fahA fahA AOB36487.1 AOB36487.1 AOB36486.1 AOB36486.1 AOB36455.1 AOB36455.1 AOB36312.1 AOB36312.1 AOB36224.1 AOB36224.1 AOB36221.1 AOB36221.1 AOB36062.1 AOB36062.1 AOB35897.1 AOB35897.1 AOB35853.1 AOB35853.1 AOB35732.1 AOB35732.1 AOB35694.1 AOB35694.1 AOB35693.1 AOB35693.1 AOB35574.1 AOB35574.1 coaBC coaBC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOB35566.1SlyX protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa)
AOB35464.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
AOB37300.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AOB35392.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
AOB35176.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (776 aa)
AOB35174.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (652 aa)
AOB35172.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)
paaDPhenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AOB34114.1isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
AOB34250.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
AOB37240.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
AOB34341.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
AOB34475.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
boxCbenzoyl-CoA-dihydrodiol lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
boxBbenzoyl-CoA oxygenase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
anmKanhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (375 aa)
AOB34798.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
AOB34916.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
paaXPhenylacetic acid degradation operon negative regulatory protein PaaX; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
paaG1,2-phenylacetyl-CoA epoxidase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
paaH1,2-phenylacetyl-CoA epoxidase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
paaIphenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
paaJphenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AOB37084.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
AOB37043.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
AOB36801.12-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
AOB36799.1PrpF protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
ligK4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
thpDEctoine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
AOB36594.1DNA alkylation response protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
fahAFumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
AOB36487.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (129 aa)
AOB36486.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (147 aa)
AOB36455.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
AOB36312.1Putative methylaconitate Delta-isomerase PrpF; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
AOB36224.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
AOB36221.1Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
AOB36062.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AOB35897.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AOB35853.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
AOB35732.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AOB35694.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
AOB35693.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (272 aa)
AOB35574.1Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
coaBCPhosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (403 aa)
Your Current Organism:
Bordetella holmesii
NCBI taxonomy Id: 35814
Other names: ATCC 51541, B. holmesii, CCUG 34073, CDC F5101, CDC nonoxidizer group 2 (NO-2), CIP 104394, DSM 13416, LMG 15945, LMG:15945, NCTC 12912
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