STRINGSTRING
AFU43779.1 AFU43779.1 AFU43780.1 AFU43780.1 AFU43781.1 AFU43781.1 AFU43782.1 AFU43782.1 AFU43783.1 AFU43783.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFU43779.1Protocatechuate 4,5-dioxygenase. (433 aa)
AFU43780.1Hypothetical protein; COG0657 Esterase/lipase. (549 aa)
AFU43781.1TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (343 aa)
AFU43782.1TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (440 aa)
AFU43783.1Hypothetical protein. (171 aa)
Your Current Organism:
Acidovorax sp. KKS102
NCBI taxonomy Id: 358220
Other names: A. sp. KKS102
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