6 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96726.1	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	APW97787.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
	APW98701.1	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	APW98704.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
	APW99863.1	LAO/AO transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	APW99864.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96726.1	APW97787.1	CHINAEXTREME_02570	CHINAEXTREME_08345	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
APW96726.1	APW98701.1	CHINAEXTREME_02570	CHINAEXTREME_13325	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
APW96726.1	APW98704.1	CHINAEXTREME_02570	CHINAEXTREME_13340	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
APW96726.1	APW99863.1	CHINAEXTREME_02570	CHINAEXTREME_19730	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LAO/AO transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
APW96726.1	APW99864.1	CHINAEXTREME_02570	CHINAEXTREME_19735	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
APW97787.1	APW96726.1	CHINAEXTREME_08345	CHINAEXTREME_02570	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
APW97787.1	APW98701.1	CHINAEXTREME_08345	CHINAEXTREME_13325	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
APW97787.1	APW98704.1	CHINAEXTREME_08345	CHINAEXTREME_13340	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APW97787.1	APW99863.1	CHINAEXTREME_08345	CHINAEXTREME_19730	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LAO/AO transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
APW97787.1	APW99864.1	CHINAEXTREME_08345	CHINAEXTREME_19735	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APW98701.1	APW96726.1	CHINAEXTREME_13325	CHINAEXTREME_02570	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
APW98701.1	APW97787.1	CHINAEXTREME_13325	CHINAEXTREME_08345	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
APW98701.1	APW98704.1	CHINAEXTREME_13325	CHINAEXTREME_13340	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
APW98701.1	APW99863.1	CHINAEXTREME_13325	CHINAEXTREME_19730	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LAO/AO transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
APW98701.1	APW99864.1	CHINAEXTREME_13325	CHINAEXTREME_19735	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APW98704.1	APW96726.1	CHINAEXTREME_13340	CHINAEXTREME_02570	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
APW98704.1	APW97787.1	CHINAEXTREME_13340	CHINAEXTREME_08345	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APW98704.1	APW98701.1	CHINAEXTREME_13340	CHINAEXTREME_13325	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
APW98704.1	APW99863.1	CHINAEXTREME_13340	CHINAEXTREME_19730	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LAO/AO transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
APW98704.1	APW99864.1	CHINAEXTREME_13340	CHINAEXTREME_19735	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999