6 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96591.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (869 aa)
	APW96723.1	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	APW96725.1	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
	APW96727.1	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	APW97485.1	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	APW98685.1	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96591.1	APW96723.1	CHINAEXTREME_01865	CHINAEXTREME_02555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
APW96591.1	APW96725.1	CHINAEXTREME_01865	CHINAEXTREME_02565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
APW96591.1	APW96727.1	CHINAEXTREME_01865	CHINAEXTREME_02575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
APW96591.1	APW97485.1	CHINAEXTREME_01865	CHINAEXTREME_06740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.676
APW96591.1	APW98685.1	CHINAEXTREME_01865	CHINAEXTREME_13245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
APW96723.1	APW96591.1	CHINAEXTREME_02555	CHINAEXTREME_01865	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
APW96723.1	APW96725.1	CHINAEXTREME_02555	CHINAEXTREME_02565	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
APW96723.1	APW96727.1	CHINAEXTREME_02555	CHINAEXTREME_02575	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
APW96723.1	APW97485.1	CHINAEXTREME_02555	CHINAEXTREME_06740	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
APW96723.1	APW98685.1	CHINAEXTREME_02555	CHINAEXTREME_13245	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
APW96725.1	APW96591.1	CHINAEXTREME_02565	CHINAEXTREME_01865	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
APW96725.1	APW96723.1	CHINAEXTREME_02565	CHINAEXTREME_02555	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
APW96725.1	APW96727.1	CHINAEXTREME_02565	CHINAEXTREME_02575	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
APW96725.1	APW97485.1	CHINAEXTREME_02565	CHINAEXTREME_06740	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
APW96725.1	APW98685.1	CHINAEXTREME_02565	CHINAEXTREME_13245	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
APW96727.1	APW96591.1	CHINAEXTREME_02575	CHINAEXTREME_01865	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
APW96727.1	APW96723.1	CHINAEXTREME_02575	CHINAEXTREME_02555	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
APW96727.1	APW96725.1	CHINAEXTREME_02575	CHINAEXTREME_02565	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
APW96727.1	APW97485.1	CHINAEXTREME_02575	CHINAEXTREME_06740	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
APW96727.1	APW98685.1	CHINAEXTREME_02575	CHINAEXTREME_13245	Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645