15 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96358.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	APW96359.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	APW96360.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APW96361.1	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	APW97009.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	APW97010.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	APW97011.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	APW98113.1	Maltose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	APW98114.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	APW98115.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	APW98116.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	APW99178.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	APW99179.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	APW99180.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	APW99181.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96358.1	APW96359.1	CHINAEXTREME_00640	CHINAEXTREME_00645	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
APW96358.1	APW96360.1	CHINAEXTREME_00640	CHINAEXTREME_00650	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
APW96358.1	APW96361.1	CHINAEXTREME_00640	CHINAEXTREME_00655	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
APW96358.1	APW97009.1	CHINAEXTREME_00640	CHINAEXTREME_04140	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APW96358.1	APW97010.1	CHINAEXTREME_00640	CHINAEXTREME_04145	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
APW96358.1	APW97011.1	CHINAEXTREME_00640	CHINAEXTREME_04150	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
APW96358.1	APW98113.1	CHINAEXTREME_00640	CHINAEXTREME_10080	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Maltose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
APW96358.1	APW98114.1	CHINAEXTREME_00640	CHINAEXTREME_10085	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
APW96358.1	APW98115.1	CHINAEXTREME_00640	CHINAEXTREME_10090	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
APW96358.1	APW99179.1	CHINAEXTREME_00640	CHINAEXTREME_15995	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APW96358.1	APW99180.1	CHINAEXTREME_00640	CHINAEXTREME_16000	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
APW96358.1	APW99181.1	CHINAEXTREME_00640	CHINAEXTREME_16005	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
APW96359.1	APW96358.1	CHINAEXTREME_00645	CHINAEXTREME_00640	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
APW96359.1	APW96360.1	CHINAEXTREME_00645	CHINAEXTREME_00650	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
APW96359.1	APW96361.1	CHINAEXTREME_00645	CHINAEXTREME_00655	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
APW96359.1	APW97009.1	CHINAEXTREME_00645	CHINAEXTREME_04140	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
APW96359.1	APW97010.1	CHINAEXTREME_00645	CHINAEXTREME_04145	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
APW96359.1	APW98114.1	CHINAEXTREME_00645	CHINAEXTREME_10085	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
APW96359.1	APW98115.1	CHINAEXTREME_00645	CHINAEXTREME_10090	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
APW96359.1	APW98116.1	CHINAEXTREME_00645	CHINAEXTREME_10095	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.646