7 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96426.1	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
	APW96774.1	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	APW96775.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	APW97636.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
	APX00094.1	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
	APW98832.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	APW98995.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96426.1	APW96774.1	CHINAEXTREME_01005	CHINAEXTREME_02850	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
APW96426.1	APW96775.1	CHINAEXTREME_01005	CHINAEXTREME_02855	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
APW96426.1	APW97636.1	CHINAEXTREME_01005	CHINAEXTREME_07555	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
APW96426.1	APW98832.1	CHINAEXTREME_01005	CHINAEXTREME_14025	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692
APW96426.1	APW98995.1	CHINAEXTREME_01005	CHINAEXTREME_14965	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
APW96426.1	APX00094.1	CHINAEXTREME_01005	CHINAEXTREME_13760	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
APW96774.1	APW96426.1	CHINAEXTREME_02850	CHINAEXTREME_01005	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
APW96774.1	APW96775.1	CHINAEXTREME_02850	CHINAEXTREME_02855	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APW96774.1	APW97636.1	CHINAEXTREME_02850	CHINAEXTREME_07555	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
APW96774.1	APW98832.1	CHINAEXTREME_02850	CHINAEXTREME_14025	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
APW96774.1	APW98995.1	CHINAEXTREME_02850	CHINAEXTREME_14965	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
APW96774.1	APX00094.1	CHINAEXTREME_02850	CHINAEXTREME_13760	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
APW96775.1	APW96426.1	CHINAEXTREME_02855	CHINAEXTREME_01005	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
APW96775.1	APW96774.1	CHINAEXTREME_02855	CHINAEXTREME_02850	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APW96775.1	APW97636.1	CHINAEXTREME_02855	CHINAEXTREME_07555	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
APW96775.1	APW98832.1	CHINAEXTREME_02855	CHINAEXTREME_14025	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
APW96775.1	APW98995.1	CHINAEXTREME_02855	CHINAEXTREME_14965	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
APW96775.1	APX00094.1	CHINAEXTREME_02855	CHINAEXTREME_13760	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
APW97636.1	APW96426.1	CHINAEXTREME_07555	CHINAEXTREME_01005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
APW97636.1	APW96774.1	CHINAEXTREME_07555	CHINAEXTREME_02850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Replication protein A protects and stabilize the intermediate ssDNA that is generated by the unwinding action of a DNA helicase at the replication fork. In addition, SSBs prevent the formation of secondary structures by single-stranded template DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730