12 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW98461.1	Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
	APW98553.1	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	APW98966.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	APW98968.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	APW99181.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	APW96361.1	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	APW97743.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	APW97930.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
	APW98087.1	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
	APW98115.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	APW98459.1	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
	APW98460.1	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96361.1	APW98115.1	CHINAEXTREME_00655	CHINAEXTREME_10090	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APW96361.1	APW98966.1	CHINAEXTREME_00655	CHINAEXTREME_14815	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
APW96361.1	APW98968.1	CHINAEXTREME_00655	CHINAEXTREME_14825	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
APW96361.1	APW99181.1	CHINAEXTREME_00655	CHINAEXTREME_16005	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APW97743.1	APW98968.1	CHINAEXTREME_08115	CHINAEXTREME_14825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.722
APW97930.1	APW98115.1	CHINAEXTREME_09115	CHINAEXTREME_10090	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
APW97930.1	APW98968.1	CHINAEXTREME_09115	CHINAEXTREME_14825	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
APW97930.1	APW99181.1	CHINAEXTREME_09115	CHINAEXTREME_16005	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
APW98087.1	APW98553.1	CHINAEXTREME_09945	CHINAEXTREME_12550	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APW98115.1	APW96361.1	CHINAEXTREME_10090	CHINAEXTREME_00655	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APW98115.1	APW97930.1	CHINAEXTREME_10090	CHINAEXTREME_09115	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
APW98115.1	APW98966.1	CHINAEXTREME_10090	CHINAEXTREME_14815	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
APW98115.1	APW98968.1	CHINAEXTREME_10090	CHINAEXTREME_14825	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
APW98115.1	APW99181.1	CHINAEXTREME_10090	CHINAEXTREME_16005	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
APW98459.1	APW98460.1	CHINAEXTREME_12015	CHINAEXTREME_12020	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
APW98459.1	APW98461.1	CHINAEXTREME_12015	CHINAEXTREME_12025	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
APW98460.1	APW98459.1	CHINAEXTREME_12020	CHINAEXTREME_12015	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
APW98460.1	APW98461.1	CHINAEXTREME_12020	CHINAEXTREME_12025	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APW98461.1	APW98459.1	CHINAEXTREME_12025	CHINAEXTREME_12015	Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
APW98461.1	APW98460.1	CHINAEXTREME_12025	CHINAEXTREME_12020	Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999