3 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW99671.1	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	APW99669.1	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)
	APW97647.1	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW97647.1	APW99669.1	CHINAEXTREME_07620	CHINAEXTREME_18670	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
APW97647.1	APW99671.1	CHINAEXTREME_07620	CHINAEXTREME_18680	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
APW99669.1	APW97647.1	CHINAEXTREME_18670	CHINAEXTREME_07620	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
APW99669.1	APW99671.1	CHINAEXTREME_18670	CHINAEXTREME_18680	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747
APW99671.1	APW97647.1	CHINAEXTREME_18680	CHINAEXTREME_07620	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
APW99671.1	APW99669.1	CHINAEXTREME_18680	CHINAEXTREME_18670	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747