34 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96358.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	APW96359.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	APW96360.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APW96760.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	APW96848.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	APW96857.1	Ferrichrome ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	APW97009.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	APW97010.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	APW97011.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	APW97096.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	APW97315.1	Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	APW97883.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
	APW97930.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
	APW97931.1	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	APX00047.1	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	APW98006.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	APW98007.1	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	APW98013.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	APW98087.1	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
	APW98114.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	APW98115.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	APW98116.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	APW98145.1	Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	APW98258.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	APW98553.1	Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	APW98780.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	APW98967.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	APW98968.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	APW98969.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	APW99178.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	APW99179.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	APW99180.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	APW99752.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	APW99893.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96358.1	APW96359.1	CHINAEXTREME_00640	CHINAEXTREME_00645	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
APW96358.1	APW96360.1	CHINAEXTREME_00640	CHINAEXTREME_00650	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
APW96358.1	APW96760.1	CHINAEXTREME_00640	CHINAEXTREME_02755	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
APW96358.1	APW97009.1	CHINAEXTREME_00640	CHINAEXTREME_04140	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APW96358.1	APW97010.1	CHINAEXTREME_00640	CHINAEXTREME_04145	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
APW96358.1	APW97011.1	CHINAEXTREME_00640	CHINAEXTREME_04150	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
APW96358.1	APW97883.1	CHINAEXTREME_00640	CHINAEXTREME_08860	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
APW96358.1	APW97931.1	CHINAEXTREME_00640	CHINAEXTREME_09120	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
APW96358.1	APW98013.1	CHINAEXTREME_00640	CHINAEXTREME_09570	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
APW96358.1	APW98114.1	CHINAEXTREME_00640	CHINAEXTREME_10085	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
APW96358.1	APW98115.1	CHINAEXTREME_00640	CHINAEXTREME_10090	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
APW96358.1	APW98145.1	CHINAEXTREME_00640	CHINAEXTREME_10250	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
APW96358.1	APW98258.1	CHINAEXTREME_00640	CHINAEXTREME_10855	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
APW96358.1	APW98967.1	CHINAEXTREME_00640	CHINAEXTREME_14820	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.676
APW96358.1	APW98968.1	CHINAEXTREME_00640	CHINAEXTREME_14825	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
APW96358.1	APW99179.1	CHINAEXTREME_00640	CHINAEXTREME_15995	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APW96358.1	APW99180.1	CHINAEXTREME_00640	CHINAEXTREME_16000	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
APW96358.1	APW99893.1	CHINAEXTREME_00640	CHINAEXTREME_19895	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
APW96358.1	APX00047.1	CHINAEXTREME_00640	CHINAEXTREME_09125	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
APW96359.1	APW96358.1	CHINAEXTREME_00645	CHINAEXTREME_00640	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924