(15 nodes) ANL, N-terminal domain network (Halobiforma lacisalsi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW99669.1	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)
	APW96372.1	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)
	APW99671.1	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	APW96699.1	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)
	APW96700.1	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (671 aa)
	APW96708.1	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	APW96721.1	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	C445_07690	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	APW97647.1	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	APW98172.1	fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
	APW98852.1	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
	APW98884.1	CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
	APW99050.1	2-succinylbenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
	APW99111.1	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
	APW99176.1	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96372.1	APW97647.1	CHINAEXTREME_00710	CHINAEXTREME_07620	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
APW96372.1	APW98172.1	CHINAEXTREME_00710	CHINAEXTREME_10390	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
APW96372.1	APW98852.1	CHINAEXTREME_00710	CHINAEXTREME_14135	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
APW96372.1	APW99050.1	CHINAEXTREME_00710	CHINAEXTREME_15270	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-succinylbenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.589
APW96372.1	APW99111.1	CHINAEXTREME_00710	CHINAEXTREME_15595	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
APW96372.1	APW99176.1	CHINAEXTREME_00710	CHINAEXTREME_15980	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
APW96372.1	APW99669.1	CHINAEXTREME_00710	CHINAEXTREME_18670	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
APW96372.1	APW99671.1	CHINAEXTREME_00710	CHINAEXTREME_18680	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetyl-coenzyme A synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
APW96372.1	C445_07690	CHINAEXTREME_00710	CHINAEXTREME_04435	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
APW96699.1	APW96700.1	CHINAEXTREME_02430	CHINAEXTREME_02435	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
APW96700.1	APW96699.1	CHINAEXTREME_02435	CHINAEXTREME_02430	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
APW96708.1	APW96721.1	CHINAEXTREME_02475	CHINAEXTREME_02545	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APW96708.1	APW98884.1	CHINAEXTREME_02475	CHINAEXTREME_14360	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
APW96721.1	APW96708.1	CHINAEXTREME_02545	CHINAEXTREME_02475	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
APW96721.1	APW98884.1	CHINAEXTREME_02545	CHINAEXTREME_14360	phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
APW97647.1	APW96372.1	CHINAEXTREME_07620	CHINAEXTREME_00710	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
APW97647.1	APW98172.1	CHINAEXTREME_07620	CHINAEXTREME_10390	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
APW97647.1	APW98852.1	CHINAEXTREME_07620	CHINAEXTREME_14135	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
APW97647.1	APW99050.1	CHINAEXTREME_07620	CHINAEXTREME_15270	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-succinylbenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
APW97647.1	APW99111.1	CHINAEXTREME_07620	CHINAEXTREME_15595	acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565