7 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW99181.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	APW98966.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	APW98257.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
	APW98115.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	APX00048.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	APW97013.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	APW96361.1	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96361.1	APW97013.1	CHINAEXTREME_00655	CHINAEXTREME_04160	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
APW96361.1	APW98115.1	CHINAEXTREME_00655	CHINAEXTREME_10090	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APW96361.1	APW98966.1	CHINAEXTREME_00655	CHINAEXTREME_14815	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
APW96361.1	APW99181.1	CHINAEXTREME_00655	CHINAEXTREME_16005	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APW96361.1	APX00048.1	CHINAEXTREME_00655	CHINAEXTREME_09130	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
APW97013.1	APW96361.1	CHINAEXTREME_04160	CHINAEXTREME_00655	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
APW97013.1	APW98115.1	CHINAEXTREME_04160	CHINAEXTREME_10090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
APW97013.1	APW99181.1	CHINAEXTREME_04160	CHINAEXTREME_16005	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
APW98115.1	APW96361.1	CHINAEXTREME_10090	CHINAEXTREME_00655	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APW98115.1	APW97013.1	CHINAEXTREME_10090	CHINAEXTREME_04160	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
APW98115.1	APW98966.1	CHINAEXTREME_10090	CHINAEXTREME_14815	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
APW98115.1	APW99181.1	CHINAEXTREME_10090	CHINAEXTREME_16005	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
APW98115.1	APX00048.1	CHINAEXTREME_10090	CHINAEXTREME_09130	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
APW98966.1	APW96361.1	CHINAEXTREME_14815	CHINAEXTREME_00655	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
APW98966.1	APW98115.1	CHINAEXTREME_14815	CHINAEXTREME_10090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
APW99181.1	APW96361.1	CHINAEXTREME_16005	CHINAEXTREME_00655	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
APW99181.1	APW97013.1	CHINAEXTREME_16005	CHINAEXTREME_04160	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
APW99181.1	APW98115.1	CHINAEXTREME_16005	CHINAEXTREME_10090	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
APX00048.1	APW96361.1	CHINAEXTREME_09130	CHINAEXTREME_00655	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
APX00048.1	APW98115.1	CHINAEXTREME_09130	CHINAEXTREME_10090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557