11 items (Halobiforma lacisalsi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APW96657.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	APW96729.1	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	APW96913.1	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	APW97342.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
	APW97940.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (477 aa)
	APW98067.1	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	gabD2	NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; Derived by automated computational analysis using gene prediction method: Protein Homology. (528 aa)
	APW99211.1	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	APW99300.1	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	APW99796.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
	APW99860.1	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)

Your Current Organism:

Halobiforma lacisalsi

NCBI taxonomy Id: 358396
Other names: H. lacisalsi AJ5, Halobiforma lacisalsi AJ5, Halobiforma lacisalsi str. AJ5, Halobiforma lacisalsi strain AJ5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APW96657.1	APW96729.1	CHINAEXTREME_02210	CHINAEXTREME_02585	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96657.1	APW96913.1	CHINAEXTREME_02210	CHINAEXTREME_03625	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96657.1	APW97342.1	CHINAEXTREME_02210	CHINAEXTREME_05950	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
APW96657.1	APW98067.1	CHINAEXTREME_02210	CHINAEXTREME_09840	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96657.1	APW99211.1	CHINAEXTREME_02210	CHINAEXTREME_16165	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
APW96657.1	APW99300.1	CHINAEXTREME_02210	CHINAEXTREME_16650	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
APW96657.1	APW99860.1	CHINAEXTREME_02210	CHINAEXTREME_19715	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96729.1	APW96657.1	CHINAEXTREME_02585	CHINAEXTREME_02210	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96729.1	APW96913.1	CHINAEXTREME_02585	CHINAEXTREME_03625	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
APW96729.1	APW98067.1	CHINAEXTREME_02585	CHINAEXTREME_09840	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
APW96729.1	APW99211.1	CHINAEXTREME_02585	CHINAEXTREME_16165	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
APW96729.1	APW99300.1	CHINAEXTREME_02585	CHINAEXTREME_16650	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
APW96729.1	APW99860.1	CHINAEXTREME_02585	CHINAEXTREME_19715	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
APW96913.1	APW96657.1	CHINAEXTREME_03625	CHINAEXTREME_02210	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
APW96913.1	APW96729.1	CHINAEXTREME_03625	CHINAEXTREME_02585	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
APW96913.1	APW98067.1	CHINAEXTREME_03625	CHINAEXTREME_09840	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
APW96913.1	APW99211.1	CHINAEXTREME_03625	CHINAEXTREME_16165	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
APW96913.1	APW99300.1	CHINAEXTREME_03625	CHINAEXTREME_16650	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
APW96913.1	APW99860.1	CHINAEXTREME_03625	CHINAEXTREME_19715	acetyl-CoA acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.646
APW97342.1	APW96657.1	CHINAEXTREME_05950	CHINAEXTREME_02210	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917