78 items (Brevibacillus brevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	abrB	Transition state regulatory protein. (82 aa)
	spoVT	Stage V sporulation protein T. (180 aa)
	BAH41434.1	Putative regulatory protein. (328 aa)
	BAH41435.1	Spore germination protein. (483 aa)
	BAH41436.1	Spore germination protein. (374 aa)
	BAH41437.1	Spore germination protein. (377 aa)
	gerKA	Spore germination protein. (503 aa)
	gerKC	Spore germination protein. (400 aa)
	BAH41640.1	Hypothetical protein. (77 aa)
	gerKB	Spore germination protein. (363 aa)
	BAH42580.1	Hypothetical protein. (306 aa)
	BAH42608.1	Spore germination protein. (513 aa)
	BAH42609.1	Spore germination protein. (386 aa)
	BAH42610.1	Spore germination protein. (376 aa)
	BAH42611.1	Spore germination protein. (376 aa)
	BAH42852.1	Conserved hypothetical membrane protein. (235 aa)
	spoIVCB	RNA polymerase sigma-K factor precursor; Belongs to the sigma-70 factor family. (119 aa)
	spoIIIC	RNA polymerase sigma-K factor precursor. (121 aa)
	gpr	Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (366 aa)
	spoIIP	Stage II sporulation protein P. (392 aa)
	yqfC	Conserved hypothetical protein. (98 aa)
	yqfD	Putative stage IV sporulation protein. (394 aa)
	BAH43233.1	Probable spore cortex-lytic enzyme precursor. (261 aa)
	BAH43299.1	Stage III sporulation protein AA. (320 aa)
	BAH43300.1	Stage III sporulation protein AB. (172 aa)
	BAH43301.1	Stage III sporulation protein AC. (67 aa)
	BAH43302.1	Stage III sporulation protein AD. (129 aa)
	BAH43303.1	Stage III sporulation protein AE. (398 aa)
	BAH43304.1	Stage III sporulation protein AF. (225 aa)
	BAH43305.1	Stage III sporulation protein AG. (231 aa)
	BAH43306.1	Stage III sporulation protein AH. (224 aa)
	spoIVB	Stage IV sporulation protein B. (444 aa)
	spo0A	Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (262 aa)
	spoIIAA	anti-sigma-F factor antagonist; Belongs to the anti-sigma-factor antagonist family. (116 aa)
	spoIIAB	anti-sigma-F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (148 aa)
	sigF	RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (251 aa)
	spoVAA	Stage V sporulation protein AA. (204 aa)
	spoVAB	Stage V sporulation protein AB. (139 aa)
	spoVAC	Stage V sporulation protein AC. (149 aa)
	spoVAD	Stage V sporulation protein AD. (335 aa)
	spoVAE	Probable stage V sporulation protein AE. (116 aa)
	spoVAE-2	Probable stage V sporulation protein AE. (194 aa)
	spoVAF	Stage V sporulation protein AF. (489 aa)
	spoIVA	Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (493 aa)
	BAH44010.1	Small acid-soluble spore protein. (68 aa)
	BAH44016.1	Conserved hypothetical membrane protein. (350 aa)
	BAH44251.1	Conserved hypothetical protein. (207 aa)
	ylbJ	Conserved hypothetical membrane protein. (410 aa)
	yfkT	Putative spore germination protein. (452 aa)
	yfkR	Putative spore germination protein. (388 aa)
	yfkQ	Putative spore germination protein. (538 aa)
	BAH44802.1	Conserved hypothetical protein. (92 aa)
	sigG	RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (259 aa)
	sigE	RNA polymerase sigma-E factor precursor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (240 aa)
	spoIIGA	Sporulation sigma-E factor processing peptidase. (320 aa)
	BAH45078.1	Putative spore cortex-lytic enzyme precursor. (215 aa)
	spoVAE-3	Putative stage V sporulation protein AE. (116 aa)
	spoVAD-2	Stage V sporulation protein AD. (338 aa)
	spoVAC-2	Stage V sporulation protein AC. (157 aa)
	BAH45082.1	Conserved hypothetical membrane protein. (286 aa)
	BAH45083.1	Conserved hypothetical protein. (68 aa)
	BAH45084.1	Small acid-soluble spore protein. (67 aa)
	BAH45400.1	Spore germination protein. (367 aa)
	BAH45401.1	Spore germination protein. (367 aa)
	BAH45402.1	Spore germination protein. (491 aa)
	gerKB-2	Putative spore germination protein. (370 aa)
	BAH45785.1	Spore germination protein. (372 aa)
	BAH45786.1	Spore germination protein. (362 aa)
	BAH45787.1	Spore germination protein. (500 aa)
	yunB-2	Conserved hypothetical protein. (241 aa)
	gerSC	Spore germination protein. (372 aa)
	gerSB	Spore germination protein. (366 aa)
	gerSA	Spore germination protein. (514 aa)
	gerKC-2	Putative spore germination protein. (393 aa)
	gerKA-2	Putative spore germination protein. (502 aa)
	BAH46092.1	Conserved hypothetical membrane protein. (239 aa)
	gerKB-3	Putative spore germination protein. (366 aa)
	spoIIR	Stage II sporulation protein R. (249 aa)

Your Current Organism:

Brevibacillus brevis

NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAH41434.1	BAH41435.1	BBR47_04570	BBR47_04580	Putative regulatory protein.	Spore germination protein.	0.570
BAH41434.1	BAH41436.1	BBR47_04570	BBR47_04590	Putative regulatory protein.	Spore germination protein.	0.555
BAH41434.1	BAH41437.1	BBR47_04570	BBR47_04600	Putative regulatory protein.	Spore germination protein.	0.555
BAH41435.1	BAH41434.1	BBR47_04580	BBR47_04570	Spore germination protein.	Putative regulatory protein.	0.570
BAH41435.1	BAH41436.1	BBR47_04580	BBR47_04590	Spore germination protein.	Spore germination protein.	0.927
BAH41435.1	BAH41437.1	BBR47_04580	BBR47_04600	Spore germination protein.	Spore germination protein.	0.937
BAH41435.1	BAH42609.1	BBR47_04580	BBR47_16320	Spore germination protein.	Spore germination protein.	0.608
BAH41435.1	BAH42610.1	BBR47_04580	BBR47_16330	Spore germination protein.	Spore germination protein.	0.658
BAH41435.1	BAH42611.1	BBR47_04580	BBR47_16340	Spore germination protein.	Spore germination protein.	0.653
BAH41435.1	BAH42852.1	BBR47_04580	BBR47_18750	Spore germination protein.	Conserved hypothetical membrane protein.	0.539
BAH41435.1	BAH43233.1	BBR47_04580	BBR47_22560	Spore germination protein.	Probable spore cortex-lytic enzyme precursor.	0.533
BAH41435.1	BAH43299.1	BBR47_04580	BBR47_23220	Spore germination protein.	Stage III sporulation protein AA.	0.701
BAH41435.1	BAH43300.1	BBR47_04580	BBR47_23230	Spore germination protein.	Stage III sporulation protein AB.	0.476
BAH41435.1	BAH43301.1	BBR47_04580	BBR47_23240	Spore germination protein.	Stage III sporulation protein AC.	0.568
BAH41435.1	BAH43302.1	BBR47_04580	BBR47_23250	Spore germination protein.	Stage III sporulation protein AD.	0.697
BAH41435.1	BAH43303.1	BBR47_04580	BBR47_23260	Spore germination protein.	Stage III sporulation protein AE.	0.648
BAH41435.1	BAH43305.1	BBR47_04580	BBR47_23280	Spore germination protein.	Stage III sporulation protein AG.	0.610
BAH41435.1	BAH44010.1	BBR47_04580	BBR47_30330	Spore germination protein.	Small acid-soluble spore protein.	0.687
BAH41435.1	BAH44251.1	BBR47_04580	BBR47_32740	Spore germination protein.	Conserved hypothetical protein.	0.493
BAH41435.1	BAH44802.1	BBR47_04580	BBR47_38250	Spore germination protein.	Conserved hypothetical protein.	0.708

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