STRINGSTRING
spoVT spoVT gpr gpr spoIIP spoIIP yqfC yqfC yqfD yqfD spoIVB spoIVB spo0A spo0A spoIVA spoIVA ylbJ ylbJ BAH44802.1 BAH44802.1 sigG sigG sigE sigE spoIIGA spoIIGA spoIIR spoIIR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spoVTStage V sporulation protein T. (180 aa)
gprGermination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (366 aa)
spoIIPStage II sporulation protein P. (392 aa)
yqfCConserved hypothetical protein. (98 aa)
yqfDPutative stage IV sporulation protein. (394 aa)
spoIVBStage IV sporulation protein B. (444 aa)
spo0AStage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (262 aa)
spoIVAStage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (493 aa)
ylbJConserved hypothetical membrane protein. (410 aa)
BAH44802.1Conserved hypothetical protein. (92 aa)
sigGRNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (259 aa)
sigERNA polymerase sigma-E factor precursor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (240 aa)
spoIIGASporulation sigma-E factor processing peptidase. (320 aa)
spoIIRStage II sporulation protein R. (249 aa)
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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