Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAH42344.1 | BAH42346.1 | BBR47_13670 | BBR47_13690 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.871 |
| BAH42346.1 | BAH42344.1 | BBR47_13690 | BBR47_13670 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.871 |
| BAH43669.1 | accC | BBR47_26920 | BBR47_23310 | Probable biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.900 |
| BAH43669.1 | pycA | BBR47_26920 | BBR47_40960 | Probable biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.425 |
| BAH43669.1 | sucC | BBR47_26920 | BBR47_34950 | Probable biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.688 |
| BAH43669.1 | yngH | BBR47_26920 | BBR47_38590 | Probable biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Probable biotin carboxylase. | 0.904 |
| BAH45221.1 | carB | BBR47_42440 | BBR47_52990 | Conserved hypothetical protein. | Arginine-specific carbamoyl-phosphate synthase large chain. | 0.900 |
| BAH45221.1 | pyrAB | BBR47_42440 | BBR47_37710 | Conserved hypothetical protein. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.900 |
| accC | BAH43669.1 | BBR47_23310 | BBR47_26920 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Probable biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.900 |
| accC | pycA | BBR47_23310 | BBR47_40960 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.426 |
| accC | sucC | BBR47_23310 | BBR47_34950 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.688 |
| accC | yngH | BBR47_23310 | BBR47_38590 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Probable biotin carboxylase. | 0.904 |
| carB | BAH45221.1 | BBR47_52990 | BBR47_42440 | Arginine-specific carbamoyl-phosphate synthase large chain. | Conserved hypothetical protein. | 0.900 |
| carB | purD | BBR47_52990 | BBR47_06070 | Arginine-specific carbamoyl-phosphate synthase large chain. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.534 |
| carB | pyrAB | BBR47_52990 | BBR47_37710 | Arginine-specific carbamoyl-phosphate synthase large chain. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.903 |
| ddl | ddl-2 | BBR47_20440 | BBR47_28450 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.904 |
| ddl-2 | ddl | BBR47_28450 | BBR47_20440 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.904 |
| purD | carB | BBR47_06070 | BBR47_52990 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Arginine-specific carbamoyl-phosphate synthase large chain. | 0.534 |
| purD | purK | BBR47_06070 | BBR47_05380 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.988 |
| purD | pyrAB | BBR47_06070 | BBR47_37710 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.541 |
page 1 of 2