STRINGSTRING
gerXB gerXB gerKA gerKA gerQ gerQ spoVAF spoVAF yfkR yfkR yfkQ yfkQ gerLA gerLA gerKB-2 gerKB-2 gerSA gerSA gerKA-2 gerKA-2 gerXA gerXA gerXC gerXC gerKB-3 gerKB-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gerXBProbable spore germination protein. (368 aa)
gerKASpore germination protein. (503 aa)
gerQSpore germination protein. (149 aa)
spoVAFStage V sporulation protein AF. (489 aa)
yfkRPutative spore germination protein. (388 aa)
yfkQPutative spore germination protein. (538 aa)
gerLASpore germination protein. (524 aa)
gerKB-2Putative spore germination protein. (370 aa)
gerSASpore germination protein. (514 aa)
gerKA-2Putative spore germination protein. (502 aa)
gerXAProbable spore germination protein. (506 aa)
gerXCProbable spore germination protein. (382 aa)
gerKB-3Putative spore germination protein. (366 aa)
Your Current Organism:
Brevibacillus brevis
NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599
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