61 items (Brevibacillus brevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	spoIVA	Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (493 aa)
	bofA	sigma-K factor processing regulatory protein. (88 aa)
	abrB	Transition state regulatory protein. (82 aa)
	spoVG	Stage V sporulation protein G; Could be involved in septation. (95 aa)
	yabP	Conserved hypothetical protein. (94 aa)
	yabQ	Spore cortex formation related protein. (190 aa)
	cwlD	Germination-specific N-acetylmuramoyl-L-alanine amidase. (246 aa)
	yndF	Putative spore germination protein. (404 aa)
	yndD	Putative spore germination protein. (497 aa)
	cotH	Putative spore coat protein. (574 aa)
	gerKA	Spore germination protein. (503 aa)
	gerKC	Spore germination protein. (400 aa)
	yraD	Putative spore coat protein F. (97 aa)
	yraE	Conserved hypothetical protein. (64 aa)
	yraF	Putative spore coat protein F. (123 aa)
	yraG	Conserved hypothetical protein. (81 aa)
	spoVR	Stage V sporulation protein R. (473 aa)
	gerQ	Spore germination protein. (149 aa)
	etfA	Electron transfer flavoprotein alpha subunit. (319 aa)
	spoIVFB	Stage IV sporulation protein FB. (278 aa)
	spo0B	Sporulation initiation phosphotransferase. (194 aa)
	bofC	Probable BofC protein; Protein synonym:bypass-of-forespore protein C. (183 aa)
	spoVB	Stage V sporulation protein B. (528 aa)
	spoIIP	Stage II sporulation protein P. (392 aa)
	yqfC	Conserved hypothetical protein. (98 aa)
	yqfD	Putative stage IV sporulation protein. (394 aa)
	cotJA	CotJA protein. (75 aa)
	cotJB	CotJB protein. (90 aa)
	cotJC	CotJC protein. (189 aa)
	spoIIM	Stage II sporulation protein M. (208 aa)
	spoIIAA	anti-sigma-F factor antagonist; Belongs to the anti-sigma-factor antagonist family. (116 aa)
	spoIIAB	anti-sigma-F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (148 aa)
	spmA	Spore maturation protein A. (196 aa)
	spmB	Spore maturation protein B. (177 aa)
	ypeB	Sporulation protein. (457 aa)
	arsC	Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. (134 aa)
	spoVK	Stage V sporulation protein K. (305 aa)
	cotE	Probable spore coat protein E. (186 aa)
	spoVS	Stage V sporulation protein S. (86 aa)
	spoVFB	Dipicolinate synthase B chain. (198 aa)
	spoVFA	Dipicolinate synthase A chain. (300 aa)
	ylbJ	Conserved hypothetical membrane protein. (410 aa)
	yfkR	Putative spore germination protein. (388 aa)
	yfkQ	Putative spore germination protein. (538 aa)
	cotSA	Putative spore coat protein SA. (382 aa)
	spoVM	Stage V sporulation protein M. (27 aa)
	spoIIGA	Sporulation sigma-E factor processing peptidase. (320 aa)
	spoVE	Stage V sporulation protein E; Belongs to the SEDS family. (364 aa)
	tpx	Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (173 aa)
	tcyA	L-cystine ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family. (275 aa)
	tcyA-2	L-cystine ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family. (277 aa)
	gerKC-2	Putative spore germination protein. (393 aa)
	gerKA-2	Putative spore germination protein. (502 aa)
	gerXB	Probable spore germination protein. (368 aa)
	smpB	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (157 aa)
	spoIIID	Stage III sporulation protein D. (94 aa)
	spoIIQ	Forespore-expressed protein. (244 aa)
	spoIID	Stage II sporulation protein D. (338 aa)
	spoIIR	Stage II sporulation protein R. (249 aa)
	spo0F	Sporulation initiation phosphotransferase F. (124 aa)
	spoIIIJ	Membrane protein OxaA precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. (252 aa)

Your Current Organism:

Brevibacillus brevis

NCBI taxonomy Id: 358681
Other names: B. brevis NBRC 100599, Brevibacillus brevis NBRC 100599, Brevibacillus brevis str. NBRC 100599, Brevibacillus brevis strain NBRC 100599

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
abrB	gerKA	BBR47_00850	BBR47_06610	Transition state regulatory protein.	Spore germination protein.	0.672
abrB	gerKA-2	BBR47_00850	BBR47_50150	Transition state regulatory protein.	Putative spore germination protein.	0.670
abrB	spoIIAB	BBR47_00850	BBR47_23950	Transition state regulatory protein.	anti-sigma-F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.640
abrB	spoIIGA	BBR47_00850	BBR47_38280	Transition state regulatory protein.	Sporulation sigma-E factor processing peptidase.	0.414
abrB	spoIIID	BBR47_00850	BBR47_54280	Transition state regulatory protein.	Stage III sporulation protein D.	0.624
abrB	spoIIR	BBR47_00850	BBR47_54760	Transition state regulatory protein.	Stage II sporulation protein R.	0.575
abrB	spoIVA	BBR47_00850	BBR47_24570	Transition state regulatory protein.	Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.	0.651
abrB	spoVG	BBR47_00850	BBR47_00960	Transition state regulatory protein.	Stage V sporulation protein G; Could be involved in septation.	0.524
abrB	yabP	BBR47_00850	BBR47_01130	Transition state regulatory protein.	Conserved hypothetical protein.	0.544
abrB	yfkQ	BBR47_00850	BBR47_36580	Transition state regulatory protein.	Putative spore germination protein.	0.705
abrB	yndD	BBR47_00850	BBR47_02900	Transition state regulatory protein.	Putative spore germination protein.	0.649
abrB	yqfD	BBR47_00850	BBR47_20610	Transition state regulatory protein.	Putative stage IV sporulation protein.	0.423
bofA	bofC	BBR47_00700	BBR47_18610	sigma-K factor processing regulatory protein.	Probable BofC protein; Protein synonym:bypass-of-forespore protein C.	0.561
bofA	spoIIGA	BBR47_00700	BBR47_38280	sigma-K factor processing regulatory protein.	Sporulation sigma-E factor processing peptidase.	0.490
bofA	spoIIM	BBR47_00700	BBR47_23780	sigma-K factor processing regulatory protein.	Stage II sporulation protein M.	0.429
bofA	spoIIP	BBR47_00700	BBR47_20050	sigma-K factor processing regulatory protein.	Stage II sporulation protein P.	0.634
bofA	spoIVFB	BBR47_00700	BBR47_18420	sigma-K factor processing regulatory protein.	Stage IV sporulation protein FB.	0.403
bofC	bofA	BBR47_18610	BBR47_00700	Probable BofC protein; Protein synonym:bypass-of-forespore protein C.	sigma-K factor processing regulatory protein.	0.561
bofC	cotE	BBR47_18610	BBR47_33780	Probable BofC protein; Protein synonym:bypass-of-forespore protein C.	Probable spore coat protein E.	0.423
bofC	gerQ	BBR47_18610	BBR47_15950	Probable BofC protein; Protein synonym:bypass-of-forespore protein C.	Spore germination protein.	0.447

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