(5 nodes) DNA polymerase complex, and DNA polymerase III, alpha subunit network (Clostridium citroniae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFS15895.1	DNA polymerase III catalytic subunit, DnaE type. (1161 aa)
	polC	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1539 aa)
	SFS21484.1	DNA polymerase III, delta subunit. (325 aa)
	dnaX	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (539 aa)
	holB	DNA polymerase-3 subunit delta'. (329 aa)

Your Current Organism:

Clostridium citroniae

NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFS15895.1	SFS21484.1	SAMN05216568_104228	SAMN05216568_107151	DNA polymerase III catalytic subunit, DnaE type.	DNA polymerase III, delta subunit.	0.991
SFS15895.1	dnaX	SAMN05216568_104228	SAMN05216568_111143	DNA polymerase III catalytic subunit, DnaE type.	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.993
SFS15895.1	holB	SAMN05216568_104228	SAMN05216568_11188	DNA polymerase III catalytic subunit, DnaE type.	DNA polymerase-3 subunit delta'.	0.992
SFS15895.1	polC	SAMN05216568_104228	SAMN05216568_104364	DNA polymerase III catalytic subunit, DnaE type.	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.919
SFS21484.1	SFS15895.1	SAMN05216568_107151	SAMN05216568_104228	DNA polymerase III, delta subunit.	DNA polymerase III catalytic subunit, DnaE type.	0.991
SFS21484.1	dnaX	SAMN05216568_107151	SAMN05216568_111143	DNA polymerase III, delta subunit.	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.994
SFS21484.1	holB	SAMN05216568_107151	SAMN05216568_11188	DNA polymerase III, delta subunit.	DNA polymerase-3 subunit delta'.	0.995
SFS21484.1	polC	SAMN05216568_107151	SAMN05216568_104364	DNA polymerase III, delta subunit.	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.919
dnaX	SFS15895.1	SAMN05216568_111143	SAMN05216568_104228	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III catalytic subunit, DnaE type.	0.993
dnaX	SFS21484.1	SAMN05216568_111143	SAMN05216568_107151	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III, delta subunit.	0.994
dnaX	holB	SAMN05216568_111143	SAMN05216568_11188	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase-3 subunit delta'.	0.955
dnaX	polC	SAMN05216568_111143	SAMN05216568_104364	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.934
holB	SFS15895.1	SAMN05216568_11188	SAMN05216568_104228	DNA polymerase-3 subunit delta'.	DNA polymerase III catalytic subunit, DnaE type.	0.992
holB	SFS21484.1	SAMN05216568_11188	SAMN05216568_107151	DNA polymerase-3 subunit delta'.	DNA polymerase III, delta subunit.	0.995
holB	dnaX	SAMN05216568_11188	SAMN05216568_111143	DNA polymerase-3 subunit delta'.	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.955
holB	polC	SAMN05216568_11188	SAMN05216568_104364	DNA polymerase-3 subunit delta'.	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.918
polC	SFS15895.1	SAMN05216568_104364	SAMN05216568_104228	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III catalytic subunit, DnaE type.	0.919
polC	SFS21484.1	SAMN05216568_104364	SAMN05216568_107151	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III, delta subunit.	0.919
polC	dnaX	SAMN05216568_104364	SAMN05216568_111143	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.934
polC	holB	SAMN05216568_104364	SAMN05216568_11188	DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase-3 subunit delta'.	0.918