STRINGSTRING
SFS03474.1 SFS03474.1 SFS03487.1 SFS03487.1 SFS03502.1 SFS03502.1 SFS03518.1 SFS03518.1 SFS03532.1 SFS03532.1 SFS03547.1 SFS03547.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFS03474.1Rubrerythrin. (181 aa)
SFS03487.1Diadenosine tetraphosphate (Ap4A) hydrolase. (142 aa)
SFS03502.1Ribose 5-phosphate isomerase B. (157 aa)
SFS03518.1L-alanine-DL-glutamate epimerase. (363 aa)
SFS03532.12-deoxy-D-gluconate 3-dehydrogenase. (281 aa)
SFS03547.1Sugar phosphate isomerase/epimerase. (273 aa)
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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